Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plut_1464 |
Symbol | tpiA |
ID | 3745452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium luteolum DSM 273 |
Kingdom | Bacteria |
Replicon accession | NC_007512 |
Strand | - |
Start bp | 1649418 |
End bp | 1650170 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637769502 |
Product | triosephosphate isomerase |
Protein accession | YP_375366 |
Protein GI | 78187323 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.11594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAGAA AAATCGTTGT CGGCAACTGG AAAATGAACA AAACGGTCGC AGAGTCGACT GCACTTGCCA CGGCGGTCAT CGCTGCGCTT GGTGACGGGT GTTCGGCCTG CGAGGCCGGC ATTGCCCCGA CCTATCCCGC ACTTGACGCC GTCGGGCGTG CTTTAGAGGG CAGCGGCATC GCGCTTGTGG CCCAGAACTG TCACTATGAA GACGACGGGG CATACACCGG AGAGGTCTCA ACCGGCATGT TGAAGGCAGT CGGCTGCAGC TACGTCATCA TCGGCCACTC CGAGCGCCGC CAGTATTTCG GGGAGACGGA CGAGACCGTC AATCTCCGCA TCAAGAAAGT GCTCGCTTCC GGCATGAAGG TTATCCTCTG CGTCGGCGAA ACGCTTGCTG AGCGTGAAGA AGGGGTAACC GGCACCGTGG TTTCACGGCA GGTGACCGAG GGGCTGAAAG GCGTTGCAGA CATTACCGAT CTCGTGATCG CCTATGAGCC GGTATGGGCC ATCGGAACAG GCAAGACCGC TTCTTCCGAT CAGGCTCAGG AAGTCCACCG CCTGATCCGT GATACGGTGA AGGGAATGTA CGGCGCTGAA GTCTCCGAGG CCGTGCGCAT CCAGTACGGT GGAAGCGTCA AGGCTTCAAA CGCCGAGGAA CTCTTCGCCA TGCCGGACAT CGACGGCGGA CTTATCGGAG GTGCCAGCCT CAACGCTGCT GATTTCGCAG CCATCGTCAA GGCTGGCTGC TGA
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Protein sequence | MRRKIVVGNW KMNKTVAEST ALATAVIAAL GDGCSACEAG IAPTYPALDA VGRALEGSGI ALVAQNCHYE DDGAYTGEVS TGMLKAVGCS YVIIGHSERR QYFGETDETV NLRIKKVLAS GMKVILCVGE TLAEREEGVT GTVVSRQVTE GLKGVADITD LVIAYEPVWA IGTGKTASSD QAQEVHRLIR DTVKGMYGAE VSEAVRIQYG GSVKASNAEE LFAMPDIDGG LIGGASLNAA DFAAIVKAGC
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