Gene Plut_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_1462 
Symbol 
ID3745450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp1645129 
End bp1647348 
Gene Length2220 bp 
Protein Length739 aa 
Translation table11 
GC content61% 
IMG OID637769500 
Producthelicase RecD/TraA 
Protein accessionYP_375364 
Protein GI78187321 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGAA AGCCTGAAGA CGGAAAGCCT GAAGACGGAA AGCCTGAAGG CGTCACGGCA 
ACAGAGCGGC TCAGCGGAGT TGTTGAAACG GTCCGGTTCT TCAACCCTGA ATCAGGCTTC
TCGGTGCTTC GCATCGCCAA TGATGAAGAG GATCCGTTGG TGACCGTGGT CGGCTGCATT
GCGTCCGTTT CTCCGGGCCA GCACGTCGAA GCGCTCGGCC GGTGGCAGGA CGACAGGAAC
TGGGGCCGGC AGTTCAAGGC CGAAAGCCTG TCGGTGATTG CCCCCGAGAG CCGGGAGGGG
ATGGAGCGAT ATCTTGCTTC CGGCATGCTT AAAGGGGTGG GGCCCCACCT GGCCTCCCTC
ATGATGAGCG CCTGGGGAAC GGATGTATTC CAGATAATCG AAACCGATCC GGAACGGCTT
CGCGACATTC CGGGTATCGG GCCGAAAAAA CAGGCACTCA TCGTGGAGTC GTGGCGCGAG
CATCAGGCGG TGCGTGAGAT CATGATGTTT CTCCAGTCGC ACGGCGTTGG TACGACGAGG
GCGTTGAAAA TCTATAAGGT CTACGGCGCT GACTCCATTG GCGCCATCAA CCGTGATCCC
TACCGGCTCA GCCGAGATAT TGCGGGCATC GGGTTCAGGA CGGCCGATGC CATTGCCCAA
AGCATCGGTA TTGCAGCGGA TTCACCGCTG CGCGCACGGG CCGGGATGAG CTGGGTGCTG
CAGGAACTTT CTTCCAAGGG TCACTGCAGG GTTCCCGAAC CGATGCTTCT CGATGCTGCG
CGTCAGCTGC TGCAGATACC CGACAGCGTC CTTGAGGAGG CTCTCCAGGT TGAATGTGCC
GCGGGGCGCA TTGTAGCCGT CCTGGAGGGA GAGGAGCGGT ACTGTTATCT GGAGTACCTC
TGGAAGGCAG AGCAGGGCGT GGTCGAGGGC ATCCGGCGGA TTGCCGGAGG GAAGCTTCCC
TGGGGCAGGC TGGACGTAGA ACGTTCGGTC ACTGAGGCTG AAGAGCGTTC ACGCCTGGAA
CTCTCTGTGT CGCAGCGGGA AGCCGTGCGG CTGGCGCTTT CCAACAAGCT GCTCATCATT
ACCGGCGGCC CCGGTGTCGG CAAGACCACC ATCATCCGTA CCCTGCTTTC CATTCCGGAG
GTGTTCGGCC TCAAGGTGCT GCTTACCGCA CCAACCGGCA GGGCGGCCAA GCGCCTTTCC
GAGGCGACCG GCCGGGAGGG TCGAACTATC CACCGCCTTC TGGAATTCGA CCCGGCAACG
TTCGATTTCA AGCGCTCTGC ACACAATCCG CTCGAGGCGG ATCTGGTGAT TGTCGATGAA
GCCTCCATGA TCGACGTGGT ATTGATGAAC CGGCTGCTTC CGGCCATACC GAAGAACGCC
GCCCTCATCC TTGCCGGCGA CGTGGACCAG CTTCCGCCTG TCGGCCCGGG TGCCGTGCTC
AGTGACCTCA TCAGTTCCGG AACGGTACGG GTGGTGCGCC TTACAGAGAT TTTCCGCCAG
GCGGCAACTT CGCTCATCAT CCAGAACGCT CACCGTGTCA ACCGGGGGGA GGGGCTCCTT
CGTCATGAGG GCCCGGGGCT CGGTGACTTT TATTTCGTGG AGTCCTCGAG TTCCGACGAC
ATCCGGAGAA AACTGGTGCA GATTGTCGCG GAACGGATCC CTGAGCGCTT CGGGCTCGAC
CCGCTGGATG ACATTCAGGT ACTGACCCCC ATGAACCGGG GACCTCTCGG TGCAGAGTCG
CTGAATGTCC TCCTTCAGGA GCGGCTGAAC GGCGGAGGCG GGAAGCGGAT CGAGCGGTTC
GGGGTCGCCT ACGGCAGGGG GGACAAGGTG ATCCAGACCG TGAACAATTA CGAAAAAGAG
GTCTTCAACG GCGATATCGG AATCATTTCG GCCATCGACC ACGAAGAGGG AGAGCTTCAG
GTGCTTTTTG ACGGCCGCGA AGTGCGCTAC CAGACGGGTG AACTTGATGA AATGGCTCCT
GCGTGGGCCA TCACCATCCA TAAAAGCCAG GGATCGGAAT ACCCAGCGGT GGTCATCCCG
CTCTCGATGC TGCACTACCC GATGCTGGAG CGCAACCTCA TCTACACGGC GCTCACCAGA
GGGCGGAAGC TGGTCATGGT CATTGGGGAG GAAAAGGCCC TCCGCCTTGC GGTGGGGAAG
TGCAGTTCGA AAGGTCGCCT CACCGGCCTC GCCGATGCCC TCAAGGGGCA TGTGCACTGA
 
Protein sequence
MNGKPEDGKP EDGKPEGVTA TERLSGVVET VRFFNPESGF SVLRIANDEE DPLVTVVGCI 
ASVSPGQHVE ALGRWQDDRN WGRQFKAESL SVIAPESREG MERYLASGML KGVGPHLASL
MMSAWGTDVF QIIETDPERL RDIPGIGPKK QALIVESWRE HQAVREIMMF LQSHGVGTTR
ALKIYKVYGA DSIGAINRDP YRLSRDIAGI GFRTADAIAQ SIGIAADSPL RARAGMSWVL
QELSSKGHCR VPEPMLLDAA RQLLQIPDSV LEEALQVECA AGRIVAVLEG EERYCYLEYL
WKAEQGVVEG IRRIAGGKLP WGRLDVERSV TEAEERSRLE LSVSQREAVR LALSNKLLII
TGGPGVGKTT IIRTLLSIPE VFGLKVLLTA PTGRAAKRLS EATGREGRTI HRLLEFDPAT
FDFKRSAHNP LEADLVIVDE ASMIDVVLMN RLLPAIPKNA ALILAGDVDQ LPPVGPGAVL
SDLISSGTVR VVRLTEIFRQ AATSLIIQNA HRVNRGEGLL RHEGPGLGDF YFVESSSSDD
IRRKLVQIVA ERIPERFGLD PLDDIQVLTP MNRGPLGAES LNVLLQERLN GGGGKRIERF
GVAYGRGDKV IQTVNNYEKE VFNGDIGIIS AIDHEEGELQ VLFDGREVRY QTGELDEMAP
AWAITIHKSQ GSEYPAVVIP LSMLHYPMLE RNLIYTALTR GRKLVMVIGE EKALRLAVGK
CSSKGRLTGL ADALKGHVH