Gene Plut_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_1338 
Symbol 
ID3744490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp1513268 
End bp1513957 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content60% 
IMG OID637769375 
ProductOmpA family protein 
Protein accessionYP_375240 
Protein GI78187197 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACC TGCTGAAACT GACCCGACCC CTCGCATTCA TCCTCATCCT TGCAACCGCC 
ACCATGACAT GGGGCTGCGA ATCAACCAGC CGCACCGGGC GTGGTGCCGG CATAGGAGCT
ACGGCGGGGG GTGTACTCGG CGGCATCATC GGAAGCCGTT CGGGAAGCTG GGTAAAGGGC
GCGTTGATCG GCGCGGCCGT CGGTGGCGCA GCTGGAGCGC TCATCGGCAA CTACATGGAC
AAGCAGGCAG CCGAGATTGA CCGCGATGTC GATGGTGCGA GGGTCGAGCG GGTCGGTGAA
AGCATCCGGG TAGTCTTCGA TTCAGGCATC CTCTTCACGA CAGGATCAGC CACCATCACG
TCCACAAGCC GGTACAACAT CGAGAAACTT GCAAGGATCC TCAACCGCTA CCCTGACACG
AACATGGTCA TCGAAGGCCA TACCGACTCA ATCGGCAGCG AAACACAGAA CCAGCTGCTT
TCCGAACGGC GTGCCGAATC GGTGGCAACC CTCCTGAAAA CCTACGGCGT CTCCAGCTCC
CGCCTCTCAC CGGTCGGATA CGGTGAAACA CGCCCGGTCG CATCGAACGA AACCGAAACG
GGACGCAGGC AGAACCGCAG GGTAGAGGTG CTGATCTATG CGAATGACGA CCTGAAAGAT
CAGGCCCAAA GCGGCGAATT GAGGATGTAG
 
Protein sequence
MTHLLKLTRP LAFILILATA TMTWGCESTS RTGRGAGIGA TAGGVLGGII GSRSGSWVKG 
ALIGAAVGGA AGALIGNYMD KQAAEIDRDV DGARVERVGE SIRVVFDSGI LFTTGSATIT
STSRYNIEKL ARILNRYPDT NMVIEGHTDS IGSETQNQLL SERRAESVAT LLKTYGVSSS
RLSPVGYGET RPVASNETET GRRQNRRVEV LIYANDDLKD QAQSGELRM