Gene Plut_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_1298 
Symbol 
ID3744772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp1470144 
End bp1471043 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content47% 
IMG OID637769334 
ProductCRISPR-associated Csh2 family protein 
Protein accessionYP_375201 
Protein GI78187158 
COG category[L] Replication, recombination and repair 
COG ID[COG3649] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01595] CRISPR-associated protein, CT1132 family
[TIGR02589] CRISPR-associated protein, Csd2 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.841348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC TTACAAAGAG GTACGATTTT GCATTACTGT TTGATGTACA GGACGGCAAT 
CCAAACGGTG ATCCTGATGC AGGAAATCTG CCCAGAATAG ATGCAGAAAC CGGCATGGGT
CTGGTAACCG ATGTTTGCCT AAAACGCAAG GTTAGAAACT ATGTGCAGCT TTCAGGTAAG
GATATTTTTA TCAAGGAAAA AGCTGTTTTG AATACCCTAA TCAGCAATGC ATATGAAGAG
CAGAAAATAG ACCTTACAAA AGATCCTGTC GATTTGAAAG ATGGCAAGAA ACGCAACAAA
GACGGCACTG CGCAAGGTGG TGAGGTCGAG AAAGGCCGTT CCTATATGTG TTCAAGATAC
TACGACATCC GCACATTTGG AGCGGTGATG TCTACAGGAG CTAACGCTGG TCAGGTGCGT
GGACCCATTC AGATTACTTT TGCCCGGTCG GTTGAGCCGG TCGTTGCATT GGAGCACAGC
ATTACCCGTA TGGCTGTCAC AACTGAAGCG GATGCGGAAA AACAAAGCGG CGATAACCGG
ACGATGGGCA GAAAGTACAC TGTACCCTAC GGGCTGTATT GTTCACATGG TTTCGTTTCG
GCTCACCTCG CAAATCAAAC CGGCTTCTCA GCAGAAGATC TCAAACTGTT CTGGGAAGCC
TTACAGAATA TGTTCGAACA TGACCGCTCT GCAGCCCGAG GTATGATGTC TACTCGAGGA
CTCTATGTTT TCGAACACAG CACAGCTTTG GGTAACGCTC CGGCCCACAA GTTGTTTGAA
CGGATTAAAG TGGAACGGAA GCCGGAATCA GAAGGTCCGG CTCGTTCATT TGAAGACTAT
ACCGTTACGA TAGATGAAAG CGGACTTGAC GGCGTGACTT TGCATAAAAT GCTGTGCTGA
 
Protein sequence
MSDLTKRYDF ALLFDVQDGN PNGDPDAGNL PRIDAETGMG LVTDVCLKRK VRNYVQLSGK 
DIFIKEKAVL NTLISNAYEE QKIDLTKDPV DLKDGKKRNK DGTAQGGEVE KGRSYMCSRY
YDIRTFGAVM STGANAGQVR GPIQITFARS VEPVVALEHS ITRMAVTTEA DAEKQSGDNR
TMGRKYTVPY GLYCSHGFVS AHLANQTGFS AEDLKLFWEA LQNMFEHDRS AARGMMSTRG
LYVFEHSTAL GNAPAHKLFE RIKVERKPES EGPARSFEDY TVTIDESGLD GVTLHKMLC