Gene Plut_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_1278 
Symbol 
ID3745143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp1445309 
End bp1446871 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content57% 
IMG OID637769314 
Productsmall-conductance mechanosensitive channel-like 
Protein accessionYP_375183 
Protein GI78187140 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGCA TGGATTTTTC TTCTGTCACT TTTGATTCCC TCTGGGCAAC CCTTGCCGCA 
GCTCTTGCTG TCGTCCTCTT CGGCTTTTTG TTTGCCGGCC GTATCGCAGG ATTTGCGGCC
GGCCTCCTTA AGCGGGTCCC CCTCATCAGG CTGGCTGTCG GCCGACTGAA GCTCAATGAT
CCATCGGCCC TCACCCGCGG CGTTACCTAT GCCGCCCGAC TGGCACTCAT ACTCGCTGCT
TGTGCCGCCG GTCTGCAGAT TCTTGCAGGT CATCCCGTCA TCGCGCGCAG TATTGGTGAA
GGATGGTTCG CTCTCAGGGG CTTGTTGCAG ATGCCTGCTG TCGAGCTGTT CGTAAATGTT
GCTCTCATTG CATTTGAGAC GTTGCTGCTG CTTCGGATAT CGGCTTGGCT CAAAACCGGC
TTCCAGGCGC TTGAAGTGCG CATCCGTCGG GAAAAGGACC GCAGGCTGAA GGGTTTTTCC
ATCCAGAAGG TGCAGGTATT CACGGCCTCC CAGCTCACCG GCTTTCTTCT TGGCCTCAGC
CGTTATGCCC GCTATACCCT CAATGCACTG CTTGCGTTTG TCTACCTGAC CGGCCTGTTC
AGCATTTTTC CCGGGACCCG CGGAACGGTG CAGAGTGCCC TCGGCTCCCT TTTCCTCAGC
ATCGAGCATG CCTGGAGCGG ATTTTTGGGC TACATCCCGA GCCTCTTCAT TCTCATGCTG
GTGATCCTCT CCACCCGGTA CGGACTGAAG CTGATCGGGT TCCTCTTCGG CGAAGTTGAA
AAAGGCACGA TCACCCTCAG CGGATTCAAG GCGGAGTGGT CCACGCCTAC CTATCAGCTG
GTCCGTTTTC TGGTGATAGC ACTCGCGCTG GTACTCTCTT TCCCGTACCT GCCGGGTTCG
TCTTCACCCG CGTTCCAAGG CATTTCGGTC TTCATTGGTC TGCTCTTCTC GCTGGGTTCA
ACCTCTGTCG TGGCCAATGT CGTCTCCGGT GTCGTGATGA CCTACACGGG CGCATTCAGG
GTGGGGGACC GGGTGAAAAT ATCCGACACC GTCGGTGACG TCATCGAAAA GGGGCTGCTC
GTCACCCGCA TCCTGACCAT CAAGAACGAG GAGATCACCA TACCCAATGG CATGGTGATG
GGAAGCCACA TTATCAACTA CAGCGGCGTG TCGCATGCGG GCAGGCTTAT CCTGCATGCT
ACCATCACCC TCGGCTATGA CATCTCCTGG CGGCTGGTGC ACGAGACCCT CATAAATGCG
GCAGGCAGGA CAGAGGGCAT CCTTCAGGAT CCGAAGCCTT TCGTCCTGCA GACCGGCCTG
GACGATTACT ATGTCCGCTA TGAGATCAAC GCCTATACCG ATTGCCCCCT GCAGATGGCC
CTTACATACT CCATGCTCTA CCAGAATATC CAGGACTGCT GCGCAGAAGC GGGCATAGAG
ATCCTTTCGC CGCATTATGC GTCCCTCAGG GACGGCAACG CCTCAACACT TCCCCCGGGG
CACCAGGAGA CGGGCGTAGA GGCACCGCAG TTCCGTGTCC ATGTTGACGG CAATGCTAAA
TGA
 
Protein sequence
MERMDFSSVT FDSLWATLAA ALAVVLFGFL FAGRIAGFAA GLLKRVPLIR LAVGRLKLND 
PSALTRGVTY AARLALILAA CAAGLQILAG HPVIARSIGE GWFALRGLLQ MPAVELFVNV
ALIAFETLLL LRISAWLKTG FQALEVRIRR EKDRRLKGFS IQKVQVFTAS QLTGFLLGLS
RYARYTLNAL LAFVYLTGLF SIFPGTRGTV QSALGSLFLS IEHAWSGFLG YIPSLFILML
VILSTRYGLK LIGFLFGEVE KGTITLSGFK AEWSTPTYQL VRFLVIALAL VLSFPYLPGS
SSPAFQGISV FIGLLFSLGS TSVVANVVSG VVMTYTGAFR VGDRVKISDT VGDVIEKGLL
VTRILTIKNE EITIPNGMVM GSHIINYSGV SHAGRLILHA TITLGYDISW RLVHETLINA
AGRTEGILQD PKPFVLQTGL DDYYVRYEIN AYTDCPLQMA LTYSMLYQNI QDCCAEAGIE
ILSPHYASLR DGNASTLPPG HQETGVEAPQ FRVHVDGNAK