Gene Plut_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_1265 
Symbol 
ID3745130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp1429586 
End bp1430788 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content57% 
IMG OID637769301 
Productinternalin-related protein 
Protein accessionYP_375170 
Protein GI78187127 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.805237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGCAAA ACACCTACAA CCAATGCCCC GTCTGCAGCT TCCCCCTCAC TGCTGACAGC 
GCCGTCTGCC CCCGGTGCGG CAACGACATT CTCGAAGAGA TCTCCTCGCT TGACCAGCAG
GACAGGGAAC GGCATAACCG TACCATAGAA GATAAAAAAG CCGAATGGTA CACCCGCTGC
CTGACCGACA AGCTCGCCGG GTTCCAGCCC CCCGAAGAGG ACACCCCGGT AGAAATAAAA
GAGAACCGGG AAGCCCGCCA TATCTGCTGC AGCCCCGATG AAGCCGAATT CCTCCGCACA
ACCAGCCGCA GGGACCTGCT CCGCGATAGC GGACTGCGGA AAAAATGGTG GGAGTCACTG
ACCGCCGAGT GGAAAGACGT GGTCCGCCAC ACCCTGAAAG TGGTTCGGGA CCCCGCTGAC
AATGAACTGC TCGCTTTTTT CGACACCACG CATCTGCGCT GCGACAACCG CAGGATCCAT
GATCTCCTCC CGGTCGCGCC CCTCGAAAAG CTTCAGCAGC TGCGGTGCGA CGAGTCCCCC
GTCGAAAGCC TTGAGCCTGT CGCCGGCCTC ACGAACCTGC AGCGTATGTA TGCCTTCGAC
TGCGATTTTT CTTCCCTTGA GCCGCTTCGC GGACTGAAAA CCCTCAAACT GCTCTGGATT
TCGAGCACAA GGGTCGCCTC ACTTGAACCG ATACGCGACC TGGAAAACCT TGAGGAACTC
TACTGCTCCG AAACCCCGAT CACCGACCTC TCTGCGCTGA GGAACCTCAA GGCCCTGGAA
AAACTCAGCT GCTATAAAAC AGGGATCACA TCCATCGACG CGCTCTCGGA CCTGGAAAAC
CTGATAGAAC TCGGCATCAA CAATTCGGCG GTCAACGACC TCTCGCCGCT TTCTGCTCTC
AAGAACCTTG AATACCTCCG CTGCAATAAA ACCGCCATCG AGAGCATCGA ACCGCTCCGT
AACCTGCCGT TCCTCCGCGA ACTCAGCATT GCAGCAACTC CGGTAAGCAG CATCGAGCCC
CTTGAGATGC ACAGCGAACT CGAAGAGCTT GACATTTCCT ATACCCAGGT ACGCTCAATC
GAGCCGGTCA TGGCCCATGA AAGCCTTGAG AAACTGGAAC TGACTGCGGG CCGGATACCC
GACATCGAGC TCGAACGCTT TATTGAACTG CACCCGGACT GCGAGGTCAT CCTGAAAAGC
TGA
 
Protein sequence
MEQNTYNQCP VCSFPLTADS AVCPRCGNDI LEEISSLDQQ DRERHNRTIE DKKAEWYTRC 
LTDKLAGFQP PEEDTPVEIK ENREARHICC SPDEAEFLRT TSRRDLLRDS GLRKKWWESL
TAEWKDVVRH TLKVVRDPAD NELLAFFDTT HLRCDNRRIH DLLPVAPLEK LQQLRCDESP
VESLEPVAGL TNLQRMYAFD CDFSSLEPLR GLKTLKLLWI SSTRVASLEP IRDLENLEEL
YCSETPITDL SALRNLKALE KLSCYKTGIT SIDALSDLEN LIELGINNSA VNDLSPLSAL
KNLEYLRCNK TAIESIEPLR NLPFLRELSI AATPVSSIEP LEMHSELEEL DISYTQVRSI
EPVMAHESLE KLELTAGRIP DIELERFIEL HPDCEVILKS