| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_1232 |
|---|
| Symbol | |
|---|
| ID | 3746001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | - |
|---|
| Start bp | 1389565 |
|---|
| End bp | 1391301 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637769268 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_375137 |
|---|
| Protein GI | 78187094 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.416855 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAGA ACGCACGGTT GAAGGATGCG ACTGTTGGCG GAGAGGAACT GCCCCGGCGC
TTTGTTCATA ATGCCGGCGG CCATGTGCGT TGCCAGAGCG GGCCGCAGTA TGAAGACCCG
CTCAGAGGTG TCTCCGGAAT GCTTAAGGGG GCCAAGGAGG GCTTTCCCCT CATCGATACG
GTCGGCGGAG AATCCTTTTT CCGTTTTCTC ACTGAAAACA GCGGCGATGT CATCTGGCTA
TATGATTTCC GGCGTAACCG CTATGTGTAT GCAAGTCCTT CCGTGTTCAG CCTGAGAGGA
TTCACCCCCG AGGAGATCTG TCGTCAATCG CTTTTCGATG CCCTCACCCC TGCCTCGGCA
CTTGTCGCCG CTGAGGAGAT CCAGTCCCGC CTGACGGCGC TCCAACAGGG AGACATTACG
GCCCGCTCGG CGGTCTGCGA GTTCGACCAG CTCTGCAAGG ACGGTTCTGT GGTTCCCACA
GAGGTGATGA CGACGTTCCT TCAGGACGCA GACGGGAATC TGTCCGGCAT CATCGGCGTT
GCGCGGGACA TACGGGAGCG GCGGAGGATC GAGGCGGAAA AAGAGCGGAT GCATTCGCTC
CTCGTCAAAG CGGGGAAGAT GGAGTCGGTG AGCCGCATTG CCGGCGGCAT CGCACATGAT
TTCAACAACA GCCTCCAGTC CATTCTCGGC CATGCCGACC TTATGCTCTC CCGACTTGGC
CCCGCTTCGG AGCATGATGG GAGTCTGGAA GAGATCCGCC AGGCGGTGAT GCACTGTGCA
GAGCTGACCA CAAGCCTTCT CTCATTCGCC CGCAAACGGG TTGTCGTTCC CAAAGTCATC
GCATGTAATG ATGCTATAGC CGGCGTACTG CAGTCAGTCA GACCGCTCTA CGCCAGCGGA
ATCGAGATTT CCTTTACCTC TTGCAGTGAG CTCTGGCCGG TGAATATGGA CCCGTCCCAG
TTCGAAGAAA TCATAGCCAA CCTGCTTGAC AATGCTGTTC TTGCGCTGGA GGGAGGCGGC
AGGATCGACA TCGTCACACG GAACGTTCCT ATGGAAGGGC ATACGCCTGA CTCTATTGGC
GAGATATCTC TGGACGATAT GGTGCTTGTC GAAGTGTCCG ATACGGGACA CGGTATGGCG
CCCGAAGTGC TCGAGCATGT TTTTGAGCCT TTCTTCTCGA CCCGCAGCGG GGCATCCGGA
CTCGGTCTTT CGACGGTATA CGGCATCGTC GAGCAGAGCG GGGGGTTCGT GAGTGTTGAG
AGTACCCCTG GAAATGGCAC CATCATGAAG CTCTTCCTTC CGCGTTCTTT CGAAATCACA
GACGGCCCTG CAGGAGCGAC TTCCGATGCA TCGACCGGCT CGGTTTCCGC AGAGGATCTT
ACCATCCTGC TTGTTGACGA TGAAGACGCT GTCCGCCATA TCACACGCCG TTTTCTTGAG
AGCATCGGCT TTCGGGTGCT CGATGCCGAA AACGCGGATG AGGCCCTCGC CAGAGCAGAG
CAGCATCATG GAGAGATTGC CATGCTCCTC ACCGACATGG TGATGCCCGG CATGAACGGC
CGGGAACTGG CTGAAAAGCT TTCTCGGGCC CGTGCCGGGC TGAAGACTCT CTTCATGTCG
GGATACGCGG CCGATGCATT TGCTGATGCC GAAGCGGGTG CGGAGCTGCA CTTCCTCGGA
AAACCATTTT CCCGGGACGC CTTGACCTCC AAAATCCGTG AAGTGCTTGA AGCGTGA
|
|---|
| Protein sequence | MRKNARLKDA TVGGEELPRR FVHNAGGHVR CQSGPQYEDP LRGVSGMLKG AKEGFPLIDT
VGGESFFRFL TENSGDVIWL YDFRRNRYVY ASPSVFSLRG FTPEEICRQS LFDALTPASA
LVAAEEIQSR LTALQQGDIT ARSAVCEFDQ LCKDGSVVPT EVMTTFLQDA DGNLSGIIGV
ARDIRERRRI EAEKERMHSL LVKAGKMESV SRIAGGIAHD FNNSLQSILG HADLMLSRLG
PASEHDGSLE EIRQAVMHCA ELTTSLLSFA RKRVVVPKVI ACNDAIAGVL QSVRPLYASG
IEISFTSCSE LWPVNMDPSQ FEEIIANLLD NAVLALEGGG RIDIVTRNVP MEGHTPDSIG
EISLDDMVLV EVSDTGHGMA PEVLEHVFEP FFSTRSGASG LGLSTVYGIV EQSGGFVSVE
STPGNGTIMK LFLPRSFEIT DGPAGATSDA STGSVSAEDL TILLVDDEDA VRHITRRFLE
SIGFRVLDAE NADEALARAE QHHGEIAMLL TDMVMPGMNG RELAEKLSRA RAGLKTLFMS
GYAADAFADA EAGAELHFLG KPFSRDALTS KIREVLEA
|
|---|
| |