| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_1163 |
|---|
| Symbol | |
|---|
| ID | 3745011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | + |
|---|
| Start bp | 1319655 |
|---|
| End bp | 1320980 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637769198 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_375068 |
|---|
| Protein GI | 78187025 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000433758 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.156813 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAT CAACGCTGAC ATCAGGAGCT CTCTCCGTAG GCGCGTTTCT GGCGCTTGCC
CTGCTCAGCC CGCCGCTCCA GGCAGCCGAA GCAACGGCGG ACGCCGTCAA CGCCTATGCG
ATAGACAACT TCTTTATCTT CATCTGTGCC GTGCTTGTCC TCTTCATGCA GGCAGGATTC
GCTCTGGTCG AAACCGGACT CAACTCCGCG AAGAACACCG TGAACATCCT GTTCAAGAAC
CTGATGGACC TTTCAATCGG CGCCATCCTG TTCTACTTCG TAGGATACGG CATCATGTAC
CCGGGTGAAG CCTTCTCGGG CGGGTTCTTC GGCTTCGGAG GATTCGGCAT CGGTTCCGTG
GCACCGGAGA CAGCCGCCGG CAACCTGCAC CCTGCAGTCG ACTTCCTCTT CCAGGTGGCC
TTTGCCGCAA CCGCTGCAAC CATCGTCTCG GGCGCCGTTG CAGGAAGGAT GCAGTTCAAG
TCCTACCTGA TCTATTCGGC AGTCATCAGC GGACTCGTCT ATCCCATCAG CGGGTTCTGG
CAGTGGGGCG GAGGCTGGTT GAGCGCGCTC GGATTCCATG ACTTCGCAGG CTCACTCCTT
GTCCACGCCC TTGGCGGATT CGCTGGACTT GCAGGCGCGA TCGTACTCGG ACCAAGGATC
GGCAGGTTCA ATGCAGACGG AACACCGAAC GCCATGCCCG GTCACAACCT TGCACTCAGC
ACGCTCGGTG TCTTCATCCT CCTCATCGGA TGGTACGGGT TCAACCCCGG CAGCCAGCTT
GCAGTCGTCG GCGCTGACAA CACCAATGCC GTCATGCTGA TCGCAGCCAA CACCACCCTT
GCGGCAACTG CCGGTGCGGT TGTGGCAATG TTCTTCGCAT GGGCGCTCTT CAAGAAGCCC
GATCTCACCA TGGGGCTCAA CGGCATGCTT GCCGGTCTTG TCGCCATCAC GGCCAACTGC
GATGCCGTCA CCTATGACGA ATCGCTCATC ATCGGTGCAG TCGGCGGTAT CCTGGTCGTT
GCCGGCATCA AGCTGCTCGA CGTGCTGAAG ATCGATGACC CTGTCGGCGC ATGGCCGGTG
CATGGACTCA ACGGTGTCTG GGGCGGTGTG GCAGCATGGA TCTTCGGCGG ACAGCCGATG
GTCGCGCAGC TCGTCGGCTC CATCGCCATC CCGCTCTGGG GATTCGCTAC AATGCTTGTT
CTGTTCTTCA TCCTGAAGGC GATGGGCGTC CTCCGCGTCT CGAGGGACGA TGAAATGAAG
GGCCTTGACA TCTCCGAGCA TGAGGAGGAG GCCTACTACG GATTCCAGAT TTTCACAACT
CAGTAA
|
|---|
| Protein sequence | MKRSTLTSGA LSVGAFLALA LLSPPLQAAE ATADAVNAYA IDNFFIFICA VLVLFMQAGF
ALVETGLNSA KNTVNILFKN LMDLSIGAIL FYFVGYGIMY PGEAFSGGFF GFGGFGIGSV
APETAAGNLH PAVDFLFQVA FAATAATIVS GAVAGRMQFK SYLIYSAVIS GLVYPISGFW
QWGGGWLSAL GFHDFAGSLL VHALGGFAGL AGAIVLGPRI GRFNADGTPN AMPGHNLALS
TLGVFILLIG WYGFNPGSQL AVVGADNTNA VMLIAANTTL AATAGAVVAM FFAWALFKKP
DLTMGLNGML AGLVAITANC DAVTYDESLI IGAVGGILVV AGIKLLDVLK IDDPVGAWPV
HGLNGVWGGV AAWIFGGQPM VAQLVGSIAI PLWGFATMLV LFFILKAMGV LRVSRDDEMK
GLDISEHEEE AYYGFQIFTT Q
|
|---|
| |