| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_0680 |
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| Symbol | |
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| ID | 3745953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium luteolum DSM 273 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007512 |
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| Strand | + |
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| Start bp | 798449 |
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| End bp | 800140 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637768719 |
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| Product | Type I secretion system ATPase, PrtD |
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| Protein accession | YP_374601 |
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| Protein GI | 78186558 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.738771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0936545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGGA CCGATATTGA ACAATTTCGT GTCGGCAAGG TTCTCCTGAT GCTGAAGAAG
GAGTTTCTCT GGGTCGGGGT ATTCAGTCTT GTTGCCAATG TCCTGATGTT GACTCCGACG
CTCTACATGC TGCAGATCTA CGACAGGGTG ATGAAAAGCG GGAGTGAACT GACGCTTTTC
GTCCTGACCG GTATCGTTCT TTTCCTTTTT GCGGTTATGG GTATTGCCGA GTGGCTTCGT
TCACGACTGC TGGTGCGCAT CGGAGTCCGG CTTGATGAAG AACTCAACTC ACTGTTGTTC
CATGCGGGCT TTTCGGCGTT TCTGCGCAAC GAGTCCCATA ATACAGTGCA GATGTTCAAT
GATTTGACCA ACATCCGGCA GTTTCTCACC GGGGTTGGCG TAATCGCTTT CTTTGACATG
CCATGGACAC CGGTCTATAT CCTGGTCATG TTCATGCTTC ACCCCGTTCT CGGACTCATC
GGGCTCGTCT TTGCCGCGGT ACAGGTCATG AGTGCATGGA AGAAGCGTTC GGCGCTTGCC
GAGCGGATAG AAGGCGCTTC AGACGCGCAT GTCAATGCAA CCGGGTATGT CCAGGGTAAA
CTGGGTAATA TCGATGCAGT CTACGCAATG GGTATGCTTG AACCGCTTCG GGAGCGTTGG
CTTGTACGCC ATGAAGCATC CGTGCTTGCG GCGGAGGAGT TCCAGAAACT GCAGCAGCGG
GAGCAGTCGT ATGCCAAATT CACCCGTTAT CTCATGCAGT CCTTTACCCT GGCGGCCGGT
GCTGTTCTCG TGCTTCGCGG TGAGGCGAGT TCCGGCGTCA TGATTGCCGG CAATGTGTTG
ATGGCCAGGG CCCTTGCGCC GCTTGACATG ATGGTGTCGA CGGCCAAACA GTATGCCCAG
GCATTTGACG GATTTCGCCG CATCGAGACC CTTCTCGACG GATTTGCAGT CCCGGAGCAG
ACATTGCAGT CCCAGGACTT GAGAGGTGTG GTCCGTATTG ACGGACTTGT GGCAACAGCC
CGTCAGGGAA CTGTACCGAT CCTTAATGCA ATCACCGCGG AATTCCGGCC CGGAGAAATT
GTGGCGATTC TCGGCCCGAG CGGATCGGGA AAGTCCACCC TTGCCCGATG CTGCATCGGG
GTCTGGCCGG AATCTAACGG CAATGTGCTT ATCGACGGGA TTCCTGTCGG AGAGTGGGAC
CGGTCGATTC TCGGTCCACA TATCGGGTAC CTCCCGCAGG ATGTAGAGCT CTTCGAAGGG
AGCGTTGCTG AAAATATTGC ACGCTTCGGA GAAGTGGATC CGGAAAAGGT CGTTGCGGCA
GCGACAAAGG CCGGTATTCA TGACATGGTC CTTTCATTTT CCAAAGGCTA TGATACCGCA
ATCAGTTTCG GCGGAAAGGA GCTATCAGGG GGCCAGCGCC AACGCCTTGC CTTCGCCCGA
GCCCTCTATG ACAACGCATC GATTCTGGTG CTTGATGAAC CTGACGCAAA TCTCGATGAA
GCGGGTGAAG GAAGCCTCAA GCGTGCGCTC AGAAAGGCTG CCGACGAGGG CAGGACAGTC
TGTGTCATAA CCCATCGTCC AGGCGTGGTC GCTCTGGCTG ACCGTGTCAT GGTAATGAGC
GCTGGGCGGA TATTGCATGA TGGCAGCCGC GATGATGTGT CTCGGGAATT GATGAAGAGT
AAATCGAAAT AA
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| Protein sequence | MKWTDIEQFR VGKVLLMLKK EFLWVGVFSL VANVLMLTPT LYMLQIYDRV MKSGSELTLF
VLTGIVLFLF AVMGIAEWLR SRLLVRIGVR LDEELNSLLF HAGFSAFLRN ESHNTVQMFN
DLTNIRQFLT GVGVIAFFDM PWTPVYILVM FMLHPVLGLI GLVFAAVQVM SAWKKRSALA
ERIEGASDAH VNATGYVQGK LGNIDAVYAM GMLEPLRERW LVRHEASVLA AEEFQKLQQR
EQSYAKFTRY LMQSFTLAAG AVLVLRGEAS SGVMIAGNVL MARALAPLDM MVSTAKQYAQ
AFDGFRRIET LLDGFAVPEQ TLQSQDLRGV VRIDGLVATA RQGTVPILNA ITAEFRPGEI
VAILGPSGSG KSTLARCCIG VWPESNGNVL IDGIPVGEWD RSILGPHIGY LPQDVELFEG
SVAENIARFG EVDPEKVVAA ATKAGIHDMV LSFSKGYDTA ISFGGKELSG GQRQRLAFAR
ALYDNASILV LDEPDANLDE AGEGSLKRAL RKAADEGRTV CVITHRPGVV ALADRVMVMS
AGRILHDGSR DDVSRELMKS KSK
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