Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plut_0655 |
Symbol | |
ID | 3744673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium luteolum DSM 273 |
Kingdom | Bacteria |
Replicon accession | NC_007512 |
Strand | - |
Start bp | 757155 |
End bp | 758594 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637768693 |
Product | type II secretion system protein |
Protein accession | YP_374576 |
Protein GI | 78186533 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.181528 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGC TTAAAGATCA GGTAGCCCGC TGGAGTCTCA CCTCGAAACG GGTTGTGGCT CCCTCAACAC CGGCGGTTCC GGCCGTTGAG GCACCGCCAA ATCCAACCGG TGCCCAGCAG AAGACTTCAC CGGCACCCGC ACCGGCGGCA AAAGCCAAAG CCGCCCCGGG ACTGGACTTT TATGCGACCA AAAGGAAGCT GCACCAGAAG CTCCTTACCA GAATCGACCT CAACTCCATC GAGAGCCTGA GCCCCGAGCA GCTGCGCACA CAGCTCGGAA CACTCCTTCT GGAACTCATC GAAGAAGAAG CCATTCCCCT GAACGATCAG GAGCGAACAC GACTGATTGC CGACCTCAAA AACGAGATCA TGGGTCTCGG CCCCTTGGAG CCCCTCCTTG CCGACCCGGC CATTTCTGAA ATCATGGTCA ACGGCTATCA TAATGTCTAT ATCGAAAAGA AGGGGAAGAT CGAACTGACC GATGTGCGCT TCAACGACGA CGCGCACCTC ATGAAGATCA TCGACAAGAT CGTCTCCCGT GTGGGACGAC GCATCGATGA ATCCAGCCCT ATGGTCGATG CCCGCCTCCC CGACGGATCG CGCGTCAACG CCATCATTCC GCCGCTCGCT CTCGACGGCC CGATCCTCAC CATCCGGCGC TTTTCGGTGG TGCCGCTGCA GATGGATGAC ATCGTGCAAA AAGAGACCCT CACGCCTGCC GTTGCAGAAC TACTCGCGGC ACTCGTCAAG GTCAAGTGCA ACATCATCAT TTCAGGTGGC ACCGGTTCGG GCAAGACCAC GCTGCTCAAC ATCCTCTCGG GCTATATCCC GGCCGATGAA CGCATCGTCA CCATTGAAGA CACTGCCGAG CTGCAGTTCC AGCACGACCA CGTCATTCAT CTGGAAACCC GCCCGCCGAA CATCGAAGGC AAAGGTGAAA TCACCATGCG CGCCCTTGTG AAAAACACGC TGCGCATGCG GCCTGACCGC ATCGTGCTCG GCGAGGTCCG GAGCAGCGAG GTGATCGATA TGCTGCAGGC CATGAACACC GGCCATGACG GCTCCCTTAC CACCATTCAT GCCAACAGCT CCCGGGATGC GCTCGGCCGC CTCGAAAATC TGGTAGGAAT GGCCGGCATC AGCCTGCCGA CAAAAGCGCT GCGCCAGCTC ATCATCTCGT CGATCCACTT CATCATCCAG ATCTCACGGC AGAGTGACGG CAGCCGCAAG ATCACGAGCA TCCAGGAAAT CACCGGCATG GAGGGTGAAA TGATCACTAC CCAGGAAATC TTCAGCTACA CACGCACCGG CACGAAACCG GACGGAACGG TGGAAGGCCT CTTCAGGGCA ACGGGTGTGC GCCCCAAAGT GTACGAGAAG ATACTCACCT ACGGCATCCA GCTCAGCGAG GGACTCTTCG ATCCTGACGC CAACGATTAA
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Protein sequence | MATLKDQVAR WSLTSKRVVA PSTPAVPAVE APPNPTGAQQ KTSPAPAPAA KAKAAPGLDF YATKRKLHQK LLTRIDLNSI ESLSPEQLRT QLGTLLLELI EEEAIPLNDQ ERTRLIADLK NEIMGLGPLE PLLADPAISE IMVNGYHNVY IEKKGKIELT DVRFNDDAHL MKIIDKIVSR VGRRIDESSP MVDARLPDGS RVNAIIPPLA LDGPILTIRR FSVVPLQMDD IVQKETLTPA VAELLAALVK VKCNIIISGG TGSGKTTLLN ILSGYIPADE RIVTIEDTAE LQFQHDHVIH LETRPPNIEG KGEITMRALV KNTLRMRPDR IVLGEVRSSE VIDMLQAMNT GHDGSLTTIH ANSSRDALGR LENLVGMAGI SLPTKALRQL IISSIHFIIQ ISRQSDGSRK ITSIQEITGM EGEMITTQEI FSYTRTGTKP DGTVEGLFRA TGVRPKVYEK ILTYGIQLSE GLFDPDAND
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