| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_0630 |
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| Symbol | |
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| ID | 3744547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium luteolum DSM 273 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007512 |
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| Strand | - |
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| Start bp | 732901 |
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| End bp | 736230 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637768673 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_374556 |
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| Protein GI | 78186513 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAA ATATGGTTTG TACGCATCAT ATGAAAACAA TTACGGGCCA AGCCCCCACA
AGCACCCTCC TGGTCAGGAA AAAAACCGGA TTCCTTACCG AGGCCGTCCG CCGTTCCGAG
CCATTCATCA GGCTGTTCGA CGCCCTCAAG GCACCCTCCG GCATCAATGA ACCGGTCCGC
ATCTCCGGCA TGCAGGGCTC GCTCGGGCCG CTGCTTGCCG CAGCGCTGCA CGACGTATGG
GAAGGTCCTG TTCTCGTGAT TGCAGGAGCG CAGGCCTTCG ACGTCTACGA CCACGACCTT
CCTGCCCTCA CCTCCGGCAA AAAGGCCTGC AGCACTGCAG ACGGGCTTCC TGCAGCCATC
AGGGCGCTCA GGGGAAGCGG CCGGCCGATC ATCCTCGCTT CGGCCAGCGA TCTTCAGACG
TCGCTCTGCC GCCCTGAGGA AGCCTCCGGC CGGATACTCC GCATCGAAAA GGACCGGGAG
GCCGGCTATG AGACACTGAA AACGTTTCTG GAAAACAACC GCTTCGTGCA CCGCGAGTTC
GTCGAGGATG AGGGCGAGTA TTCCGTACGC GGCTCCATTG TCGACATATT CCCATACGGA
ACGGGCGAAC CGGTCCGGAT TGAATTTTTC GGTGACACCG TCACCTCGCT CCGAAGCTTC
GACATCAACA GCCAGCTTTC CGGCAGAACG CTCGATGCGG CCGAACTCTC CGCAGACTTA
ACAGGGGAAG GTCCGGAAGC GGCGGCGACG ATGCTCGACT ACCTCCCACC CTCCACGCTC
GTCATAATCG ACAGCACCCC GGAAATCCGG GCTGAGGAGG ACGACCGGGA GCTCGAGGCG
GCACTCGGGC AGTTCCTGCA GATCGAGATC GGGCCCGCCA GAGATGGGTC CATCGACTTC
CAGTCAGTCG AACAGACAAG GATCAACGCC AACTTCCGCA TGCTGGCCAC CATGCTCAGC
CGACGGGACG AAGCCAGGCG ACGGACAGTG TTTGCCGCAT CCAGCGAGCG GGAAGTTCGC
GAGCTCGCCG ACTTCCTCAC CGAGGAAGCT GCCGAAGCCG GTGAGGGCGT ACTTGAGGAA
ATCGCCTGGG TGCCGGTAAA CCTGCACAGC GGGTTCCGCT TTGCAGGCAT CGACCTCTTT
ACCGAAGCAG ACATCTTCGG CAAGCTCCAC TCGCGCAGGG CGCGCAGAAA ACGAAAAATC
AAGGGAATCT CCCTCAAAGA CCTCCAGAAG CTCAAGGTCG GAGACCATGT CGTGCATGAG
GACTACGGGG TCGGAATCTT CCGTTCCCTG GAAACCATCA CCGCGGGGAA TTCGGAGCAG
GAGTGCGTGC TGGTTGAATA TGAAGGGGGC GACCAGCTCT TCGTCAATGT CCAGAACATC
AACCTTCTCT CCAAATACGC CGCATCCGAA GGATCCAGAC CGGTCCTCTC CAAGCTCGGC
AGCCCGAAAT GGGCGGCCAG GAAAGAGAAG GTCCGCTCGA AGATCCGCGA CATCGCCATC
AACCTCATCA AGCTCTATGC CCAGAGGAAA ATGCAGGCCG GATTCGCATT CGGTCCCGAC
TCCATCTTCA TGCGCGAATT CGAGTCTTCC TTCATCTTCG AGGAGACCCC CGACCAGCTG
AAGGCCATCG AAGAGGTGAA AAAGGACATG CAGGCGACGC ACCCCATGGA CCGCCTCATC
TGCGGCGACG CCGGGTTCGG CAAGACCGAG ATCGCCATGC GGGCGGCATT CAAGGCCGTC
GAAGCCAAAA AGCAGGTGGC CATCCTGACG CCGACGACCA TTCTCGCGCA CCAGCATCTG
GAAACATTCA CCCGGCGTTT TCTGAACTTC CCCATCACCA TTGCAATCCT GAGCCGGTTC
GTCCCCCGTG CGGAGCAGCA GGAGACCATC CGCCGCATCA AGGAAGGCAA GGTAGACATC
GTCATCGGTA CCCACCGCCT CGTTTCAAAA GACGTCAGTT TCCGGGACCT TGGACTGCTC
GTCATCGACG AGGAGCAGCA TTTCGGCGTG GAGGTCAAGG AAAAGCTGCG CGAACAGTTC
CCCGGCGTCG ACACCCTCAC CATGTCGGCA ACCCCGATTC CCAGAACCCT TCAGTTCTCA
ATGCTCGGAG CCCGCGACCT CTCCATCGTC TCCACCCCGC CAAAAAACCG GCAGCCGGTG
GAAACCGTCG TCACCGACTT CGAGGGCGAT CTCATCCGAT CGGCCATCGA GCGGGAAATC
GCACGAGAGG GTCAGGTATT TTTCCTCCAT AACCGGGTTG CCAGCCTCGG AGAGATGCAG
CAGCTGCTCC ACGATCTGGT GCCCCGCGCC CGGATTGTCT TCGCGCACGG GCAGATGCCG
GCACGCGAAC TCGAAAAGAT CATGATGGAT GTGATGCAGG GCGAGGTGGA CGTGCTCATC
TCGACCACCA TCATCGGCTC GGGCATCGAC ATATCAAACG CCAATACCAT CATCATCAAC
CGGGCTGACA TGTTCGGCCT CTCGGACCTC TACCAGCTCC GGGGACGGGT AGGCCGCAGC
GACCGCAAGG CCCACTGCTA CCTGATCACC CCGCCGCTCA ATACCCTCAA GCGGGAGGCC
ATACAGCGGC TTGCCGTCAT CGAAAGCTTC ACCGAGCTCG GTTCAGGGTT CACGATAGCG
CTGCGCGACC TCGACATCCG AGGCGCCGGC AACCTCCTTG GTGCCGAACA GTCCGGCTAC
ATCCACGACC TCGGCTTCGA TCTCTACCAG AAAATGCTCG AACAGACCGT TGCCGAACTG
AAATCGGGCG ATTTCAGCCA CCTCTTCACC GGTGAAGCCC GGCCTGACCT GCCGGAGAAG
CCGACCGACA TGTCCTTCTT TTTCGACGCG CTCATTCCCG AACACTACGT TACGGCAACC
CACGAGCGGT TCATGTTCTA CGAAAAAATC TCCCGTGCCG CCGCAGCCCG GGACATCGAC
GCTGTCGGTG CGGAACTGCG GGACCGGTTC GGCCCCCTTC CCGAAGAGGT CGAAACCCTC
ATGCTCCTGG CAAAGCTCAA GATCACGGCT TCACCGCTCG GTCTCGAAAA AATAGATCTG
CAGCAGAAAA CCACCACGCT CATCCTCCCC GACGCCAGAG AGGACGGTCC CGTTCAGGGA
AGGGAGTTCC TGCAGCATCT CTTCACCGCC GTCCAGGAGC CGAGCCTCGA ACCTTACGCC
CCGGCCTTCA GTTTCGAGAA GAAAATGAAA CTCGTCCTGC ACCACCCGCC GGGAGCCGAC
ACTGCGCCGA CTGATCTGTT GAGGCGATAC ACCGCGCTAA TCAGGGAACT CGACACCGCC
TCCAGGGAAC AGAACGCAAC AGAGAACTGA
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| Protein sequence | MDENMVCTHH MKTITGQAPT STLLVRKKTG FLTEAVRRSE PFIRLFDALK APSGINEPVR
ISGMQGSLGP LLAAALHDVW EGPVLVIAGA QAFDVYDHDL PALTSGKKAC STADGLPAAI
RALRGSGRPI ILASASDLQT SLCRPEEASG RILRIEKDRE AGYETLKTFL ENNRFVHREF
VEDEGEYSVR GSIVDIFPYG TGEPVRIEFF GDTVTSLRSF DINSQLSGRT LDAAELSADL
TGEGPEAAAT MLDYLPPSTL VIIDSTPEIR AEEDDRELEA ALGQFLQIEI GPARDGSIDF
QSVEQTRINA NFRMLATMLS RRDEARRRTV FAASSEREVR ELADFLTEEA AEAGEGVLEE
IAWVPVNLHS GFRFAGIDLF TEADIFGKLH SRRARRKRKI KGISLKDLQK LKVGDHVVHE
DYGVGIFRSL ETITAGNSEQ ECVLVEYEGG DQLFVNVQNI NLLSKYAASE GSRPVLSKLG
SPKWAARKEK VRSKIRDIAI NLIKLYAQRK MQAGFAFGPD SIFMREFESS FIFEETPDQL
KAIEEVKKDM QATHPMDRLI CGDAGFGKTE IAMRAAFKAV EAKKQVAILT PTTILAHQHL
ETFTRRFLNF PITIAILSRF VPRAEQQETI RRIKEGKVDI VIGTHRLVSK DVSFRDLGLL
VIDEEQHFGV EVKEKLREQF PGVDTLTMSA TPIPRTLQFS MLGARDLSIV STPPKNRQPV
ETVVTDFEGD LIRSAIEREI AREGQVFFLH NRVASLGEMQ QLLHDLVPRA RIVFAHGQMP
ARELEKIMMD VMQGEVDVLI STTIIGSGID ISNANTIIIN RADMFGLSDL YQLRGRVGRS
DRKAHCYLIT PPLNTLKREA IQRLAVIESF TELGSGFTIA LRDLDIRGAG NLLGAEQSGY
IHDLGFDLYQ KMLEQTVAEL KSGDFSHLFT GEARPDLPEK PTDMSFFFDA LIPEHYVTAT
HERFMFYEKI SRAAAARDID AVGAELRDRF GPLPEEVETL MLLAKLKITA SPLGLEKIDL
QQKTTTLILP DAREDGPVQG REFLQHLFTA VQEPSLEPYA PAFSFEKKMK LVLHHPPGAD
TAPTDLLRRY TALIRELDTA SREQNATEN
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