Gene Plut_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_0602 
Symbol 
ID3744704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp702654 
End bp704222 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content60% 
IMG OID637768645 
Product2-isopropylmalate synthase 
Protein accessionYP_374528 
Protein GI78186485 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00973] 2-isopropylmalate synthase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGAGA AAATCCTGGT TTTCGATACT ACTCTCCGGG ACGGAGAACA ATCCCCCGGA 
GCCTCCCTGA ATGTCCAGGA AAAGGTTGAG ATAGCCCGAC AGCTCGAAAA GCTCGGGGTG
GACATCATCG AGGCGGGTTT CCCCGCCTCA TCCCCGCTCC AGTTCGAAGC GGTCGAACGC
GTCAGCGCTG AATCAGGCGC AGTGGTCGCC GCTCTCTCAC GGGCGGTCGA GGGTGATATT
ACCTCGGCCT GGAAAGCACT GCAGCATGCC CGCAAGCCCC GCATCCATAC ATTCATCAGC
ACTTCCGACA TCCACATCCT CGGCAAGTTT GCAGCAGACC GCTACGGCCG GACCCTCGAG
GAGAAGCGGC GCACCATCCT CAAGATGGCT GTAGACGCTG TCGCGTTCGC CAAAACCCTT
GCCCCGGACA TCGAGTTTTC CGCCGAAGAC GCAGGAAGGA CCGATCCCGG GTACCTCGCA
GAAATTGTCG AGGCAGTCAT CGCTGCCGGC GCAACGACGG TGAACATCCC TGACACCACC
GGCTATACCT GGCCCTCGGA GTTCGGCAGG AAAATCGCCG ACCTACGTTC CCGCGTAGGG
AACATCGACC AGGCCGTCAT CAGCGTGCAC TGCCACAACG ACCTCGGCCT TGCTGTCGCC
AACACCCTCT CGGCCCTTGA AAACGGCGCC CGCCAGGCCG AGTGCAGCGT GAACGGCATC
GGGGAGAGGG CCGGCAACGC CTCCCTTGAG GAGATCGTCA TGGCACTCAA AGTCCGCAGC
GACCTGCACA ACTTTGAAAC CGGCGTCACT ACCGAAGAGA TCTTCAAGAC CAGCCGCATG
GTCTCGTCGT TCACCGGCAT CATCGTCCAG CCGAACAAGG CGATTGTCGG CGAGAACGCC
TTCTCGCACG AGTCCGGCAT CCATCAGGAC GGCATGCTGA AAAACCGCCA GACTTACGAA
GTCATGACCC CGGAATCGGT CGGCGTGCCG AAAACCAGCA TCGTCCTCGG CCGCCACTCC
GGCAAACACG GCCTCAAGGC CCGCCTCGAA TCCCTCGGCT ACGCACTCGC CGACGGCGAC
CTTGAATCGG TGTACCGCAG GTTCATGGAG ATCGCCGACA AGAAAAAAGA GGTGTACGAC
GACGATCTCC GATTCCTTAT GGGAGATGAG CTCTCGAGCC CCTCATCTGC CTTCACGCTT
GACTACCTGC ACATCAACAG CGGTACCGCC TCCATCCCTA CGGCCACCGT ACGGATTCTG
CACCGGGACA GTGTCTTCGA AGAGTCGGCA ACGGGCGACG GACCGGTCGA CGCCTGCTTC
AGGGCGATTG AGCGGGCACT CGGCATCACT TCAATGGTCT CGAGCTATAC TGTCCGCTCC
GCTACGGCAG GGCGCGAAGC GCTCGGCGAA GCGCTTGTGC GCATCAAGGA CAAAAACCGC
ACATACAGCG GCAGGGGCGT CTCCACCGAC ATCATCGAAG CCAGCGCCAG AGCCTACATC
CAGGCGCTCG GCCTCCGCCT TGAACACGAA GAAAACAATC ATAACGAAAC CACAGAGCAC
GGGGTTTAA
 
Protein sequence
MKEKILVFDT TLRDGEQSPG ASLNVQEKVE IARQLEKLGV DIIEAGFPAS SPLQFEAVER 
VSAESGAVVA ALSRAVEGDI TSAWKALQHA RKPRIHTFIS TSDIHILGKF AADRYGRTLE
EKRRTILKMA VDAVAFAKTL APDIEFSAED AGRTDPGYLA EIVEAVIAAG ATTVNIPDTT
GYTWPSEFGR KIADLRSRVG NIDQAVISVH CHNDLGLAVA NTLSALENGA RQAECSVNGI
GERAGNASLE EIVMALKVRS DLHNFETGVT TEEIFKTSRM VSSFTGIIVQ PNKAIVGENA
FSHESGIHQD GMLKNRQTYE VMTPESVGVP KTSIVLGRHS GKHGLKARLE SLGYALADGD
LESVYRRFME IADKKKEVYD DDLRFLMGDE LSSPSSAFTL DYLHINSGTA SIPTATVRIL
HRDSVFEESA TGDGPVDACF RAIERALGIT SMVSSYTVRS ATAGREALGE ALVRIKDKNR
TYSGRGVSTD IIEASARAYI QALGLRLEHE ENNHNETTEH GV