| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_0554 |
|---|
| Symbol | hisD |
|---|
| ID | 3746220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | + |
|---|
| Start bp | 647524 |
|---|
| End bp | 648855 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637768593 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_374481 |
|---|
| Protein GI | 78186438 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.677431 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.387013 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCACCAG TGCATTACAG GACTTCAACC TCAACGATTG TGGCAGTGCT CAAGCTTTAC
CGATTTCTCG ATGACCGCGA TGCCCTCTTC CGCCAGATAG GGCGCAGTGT TGACTTCGAT
CCCGAGGTCC AGCGGGCCGT TACCGACATA CTCGAGGCCG TCCGCCTCCG CGGCGACATG
GCCGTGCTGG AATACACCGA GCGCTTCCAG GGCGCAGTCC TCACCTCCAT GCAGGTGCCG
GAAGAGGATA TCCTTCGCGC AAGAGAGGAG GCCGATCCCG CATTCATCAG GGTGCTTGAG
GAGGCATGGG AGAATATCCT CCGTTTCCAC CGCCATGAGG TGGAAAACAG CTTTTTCTAT
GAGGGTGAAG GCGGTGTCGT GCTCGGCCAG CGTGTTACCC CCATGGACAG GGCTATGCTT
TACGTGCCCG GCGGCAAGGC ATCCTATCCC TCTTCCGTCC TGATGAATGC GGCCCCCGCG
CGCGTCGCCG GAGTTGGCGA GATCTTCATG ACCACGCCCT GCGATGCTTC GGGGGCGGTC
AGTCCGCACA TTCTCGCCGC GGCTTCTGTC GCCGGCGTGA CCTCCGTATA CCGTCTTGGC
GGCGCACAGG CCGTTGCCGC CTTCGCTTAT GGCACCCAGA CCATCCCCAA AGTCGACATC
ATCACCGGTC CCGGCAACAA GTATGTGGCC CTTGCCAAGA AGCAGGTATT CGGTCATGTC
GCCATCGACA GCATTGCAGG CCCCTCGGAA GTGGTTGTCG TGGCGGACGA TGATGCCGAT
GCGGAGTTCA TCACGATGGA CCTCTTCGCC CAGGCCGAGC ACGATCCCGA TGCATCGTCC
GTCCTCATCA CCCCTTCCAT GCGGCTTGCC GAGGAGGTCC GTGACCTTGC GGCCGCCCGT
GTCGGCTCCA TGCTCCGCGG GGAGGTGATC GCAGAGGCGC TCAGCAACAA CGGCGCCATC
GTCGTGGTGG CGGACATTGA GGAGGCCTGC CGGGTCTCCG ACATGATCGC TCCCGAGCAT
CTGGAGCTGC ACGTGCTGCA CCCGTGGGAG CTTTTAGCCT CGATCCGCCA CGCCGGTGCC
GTCTTCATGG GCGGGTACTC CTGCGAGACG GTCGGTGACT ATTACGCCGG CCCGAACCAT
ACCCTGCCGA CCAACGGCAC GGCGCGCTTC TTCTCGCCGC TTTCCGTGCG CGATTTCGTG
AAGCACACCT CCATCATCTC CTACACCCGC AGGCAGATCA TGGCGTGCGG GGAGAGGATC
GCCTCCTTTG CCGACCATGA GGGGCTAGAG GCCCATGCTG AAGCCGTCCG GGCAAGGTTG
AAGAAAGGAT GA
|
|---|
| Protein sequence | MSPVHYRTST STIVAVLKLY RFLDDRDALF RQIGRSVDFD PEVQRAVTDI LEAVRLRGDM
AVLEYTERFQ GAVLTSMQVP EEDILRAREE ADPAFIRVLE EAWENILRFH RHEVENSFFY
EGEGGVVLGQ RVTPMDRAML YVPGGKASYP SSVLMNAAPA RVAGVGEIFM TTPCDASGAV
SPHILAAASV AGVTSVYRLG GAQAVAAFAY GTQTIPKVDI ITGPGNKYVA LAKKQVFGHV
AIDSIAGPSE VVVVADDDAD AEFITMDLFA QAEHDPDASS VLITPSMRLA EEVRDLAAAR
VGSMLRGEVI AEALSNNGAI VVVADIEEAC RVSDMIAPEH LELHVLHPWE LLASIRHAGA
VFMGGYSCET VGDYYAGPNH TLPTNGTARF FSPLSVRDFV KHTSIISYTR RQIMACGERI
ASFADHEGLE AHAEAVRARL KKG
|
|---|
| |