Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plut_0343 |
Symbol | |
ID | 3745229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium luteolum DSM 273 |
Kingdom | Bacteria |
Replicon accession | NC_007512 |
Strand | + |
Start bp | 352476 |
End bp | 354545 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637768382 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_374274 |
Protein GI | 78186231 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.135812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCGGA TTAAGCAGTT CCGGCAACGA CTGTTCCTCC TCCATCCGGC ATCCCTCGGG GGTATTTTTT TTCTTCTCTT CATCGTCTTT CTCACCTCTA CCCTGTTCGA ATACCGATAC CGCCGGCTTG AGATCGAGCA CATGATGGAA GAGGAGGCCT CGCTTCTTAT CCATGCACTG ACGGTCGGCG CCGAAAACGC CGTTGAGGGC TACAACGGGA ACCGTACGAT TTTGACCGGA AGCCTCCTTG GACGGCTCCG GCTGCTCGAC CGGCTCGACC GCCAGAAACC GCTGACCTCC CGTGCCCTTA AGGATATTGC CGGAAGGGGC GGTATGTACC GGATCAACGT GTTCGACCGC ACTGGCCGGC GCATTGCCTG GAATGTTCCG CCAGACCATG CACCCTCGCT TCACCACCGG GATCCGAAGC GGGAGCTGGA GCCGATTCTG TCCGGCAGGG TTGACTCTCT CGTGCTTGGC ATCAGGCAGA GTGTCTCGGA CCGGGGCCCC CGGCTCATCG CTGCAGTCGC CAGAAGCCGG GGTGGTGCCA TTGTCGGCAA TGTCGATGCT TCAGAGCTGC TTGAGCTCCG CCGAAGTATC GGCGCGGGGA GCCTGATACG GAAAATAGGC GCCGGCGAGG CGGGCATCGA CTACATCATC TGGCAGGATA CCACGGCAAT CCTTGCGGCG ACCCCGAACG TATCGGGCGC TGACCCGCTG CTTGCCGATC CGGTGCTTGC GGCTGCCTTG AGGGCGAGGA AGCCGACGAC GCGCATGACC GAATTCGACG GCAGGCCTGT GTTTGAGGTC GTCAACCCGT TCTATTACCG CGGAGCCAAT GTGGGCCTGC TTCGCGTCGG CCTCAGAACC GACCATTTCA ACGCGGCCTT CGCCAAGCTC CGCAACCGGT TTTTCATGAT GCTCGGCCTT CTCTTTTTCG GGGGACTCGC CCTGTTCAAT CTGGTGATTA CCAGGCGCGA CAGGGCCCTT GCCGCCGGGG CCTATCAGAG GGTAAGCACT TTTTCCTCAT CGATGCTTAC AAGCATGGCC GATGCGGTGC TGTCGGTCAA CGGCGCCGGC GCCCTCACCC TCTTGAATGC CGCAGGTGAA CGACTGTTCG GGGTTCGGGC GGATGATGTT CTTGGCAGGT CTGCCGCATC GCTCTCGTTG GAGCTTGCGT CGCTTTTTGC TGAGGCGGCT TCGGGTGAGT TCTCTGTGAT GAAGCGGGAG TTCCGCTGCC GGGCCGGAGG GCGGGAGCAT GTGCTCGAGG GAAGCTTCAG CAGGATCTCG GAGGGCCAGG GGGGTGCTGA GGACTGGCAG GGGACCGTTG TCGTGCTACG TGACCTCACG GAACACCATG CCATGCAGGA ACGACTTGAG CGGCAGGGGA AGCTTACGGC GATGGGTGAA CTGGCTTCAG GGGTTGCCCA TGAGATCCGC AACCCGCTGA ACGCGATCGG TCTCATCGCC CAGCGGCTTG ACATCGAGTT TACCCCGAAG GAAGACGAAG CAGAGTTCCG GCACCTTCTC CGGACGGTTG TCTCCGAGGT GCACCGCCTC AACGCCATCA TCCAGCGATT CCTTCGCTTC GCACGACCGC CGGCGCTCGA GGTGGTTCCG ACAGATCTGG CTGCATTCGC CGCAGATTAC CGTGCAGTGC TTGAGGGTGA GGCCTCGGAC AAGGGGGTTG CCTTCAGCCT CTCCGGCGCG CCGGGAACGG TTGCCCTGAT CGATAGGGAC CAGATGCAGC AGGTACTGCT CAACATCGTC CGCAACGCCG TGGAAGCTAC ATCCCGGGGA GGTGCTGTGT CGGTTTCGGT GTCGGCCGAT GCAGGATCGG CTGTCATCGA GGTGGCCGAT ACCGGAAAAG GAACAACGCC GGATGAGCGT CATCGGATGT TCAACCTCTA CTTTACAACG AAGGATGACG GAACCGGCAT GGGGCTGAGC ATCGCAAGCC AGATCGTGCA GTCCCACGGA GGGACGATCG AGGTGAATGA CCGCCCGGGG GGCGGAACCG TATTCAGGAT CCTCGTTCCG CAGGCCCCGC CCTCGGGCGG GGATTCCTGA
|
Protein sequence | MSRIKQFRQR LFLLHPASLG GIFFLLFIVF LTSTLFEYRY RRLEIEHMME EEASLLIHAL TVGAENAVEG YNGNRTILTG SLLGRLRLLD RLDRQKPLTS RALKDIAGRG GMYRINVFDR TGRRIAWNVP PDHAPSLHHR DPKRELEPIL SGRVDSLVLG IRQSVSDRGP RLIAAVARSR GGAIVGNVDA SELLELRRSI GAGSLIRKIG AGEAGIDYII WQDTTAILAA TPNVSGADPL LADPVLAAAL RARKPTTRMT EFDGRPVFEV VNPFYYRGAN VGLLRVGLRT DHFNAAFAKL RNRFFMMLGL LFFGGLALFN LVITRRDRAL AAGAYQRVST FSSSMLTSMA DAVLSVNGAG ALTLLNAAGE RLFGVRADDV LGRSAASLSL ELASLFAEAA SGEFSVMKRE FRCRAGGREH VLEGSFSRIS EGQGGAEDWQ GTVVVLRDLT EHHAMQERLE RQGKLTAMGE LASGVAHEIR NPLNAIGLIA QRLDIEFTPK EDEAEFRHLL RTVVSEVHRL NAIIQRFLRF ARPPALEVVP TDLAAFAADY RAVLEGEASD KGVAFSLSGA PGTVALIDRD QMQQVLLNIV RNAVEATSRG GAVSVSVSAD AGSAVIEVAD TGKGTTPDER HRMFNLYFTT KDDGTGMGLS IASQIVQSHG GTIEVNDRPG GGTVFRILVP QAPPSGGDS
|
| |