| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_0326 |
|---|
| Symbol | |
|---|
| ID | 3744920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | - |
|---|
| Start bp | 335790 |
|---|
| End bp | 337277 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637768364 |
|---|
| Product | O-succinylbenzoate-CoA ligase |
|---|
| Protein accession | YP_374257 |
|---|
| Protein GI | 78186214 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.013654 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCTC TGAGGTCTCC GGCACCGGAC CCGGTGGCCG ATGCCGCTTC CCGGTTCGGC
CCGATGCCCA TGCTTCTCAC CCCGGATGGC AGCCGTTCAT TCAAGGAGTG TAGCGCCATG
GCCGGACGGA TAGCCGCCGC GCTCCTGAAC AGGGGCCTCC GGGATGGTGA TGGTGTCGCC
ATCATCTCCC CGAACACTCC CGATATGGTC CTCATCCTGC TCGCCCTCCT CAGCGCAGGA
ATGGTGGCGG CCCCCCTCAA CCACCGCCTG CCGGAAGCAA GGCTGCGCCA GATGCTTCAG
GAGCTGCAGC CGTCCCTTTG CATCACCGGA GCGGAATGCC CCGCCCCGGA CACGGATACG
GCTTCAATTG ACGCCGCGGA GCTGCTCGCT GAAGCCTCCG CCCTCCCGGA CCGCCGGAGT
GCGCTGCTGA ACCACAAAGG CACGACCGTA CGGCCAATCA CCATAATCCA CACGTCTGCA
AGCACCGGCA CAGCAAAAGC AGCGGTGCAC TCGCTGGAGA ACCATTGGTA CAATGCACTC
GGCTCCAACA GCAACCTGCC GTTCGGGCCC GGAGACACCT GGCTCCTGTC GCTCCCCCTT
TTCCATGTCG GCGGCTACGC CCTCATCTTC CGTTCACTGG CATCGGGCGG CGCCCTTGCC
ATTGACCGGC CGCATGCATC CCTCACCGAC TCCCTCGAAC GCTTCCCGAT CTCGCACCTC
TCGCTTGTTC CGACCCAGCT TTTCCGGCTA CTCTACAGGG AAAATGATCC GGCCCTGACG
GCCGGAATCA AAGCCCTACT CCTCGGCGGA AGTGCTGCTT CCGGCAGCCT CGTCGACGAG
GCTGCCGCAA GAGGCCTCCC CATTTACCTG AGCTACGGTT CAACGGAGAT GGCCTCGCAG
ATCGCCACCA CCGACGCTCC GGTTGCGAGG CACCGCTCCG ACAGCGGCAG GGTGCTCCCG
TGGAGGGAGG TCCGGGAGGC ACCGGACGGC GAGCTTCTGG TGCGCGGGAA GTGCCTCTGC
ACAGGCTACC TCAGAAACGG AGCCATAGAC CCCATCGGTG ACCCGGACGG GTGGTTCCAT
ACCGGTGACA TCGGCTCGCT TGCCGCCGAC GGCACGGTGC GGGTGCTCGG AAGAAAAGAC
GACATGTTCA TCTCTGGCGG AGAAAACATT CACCCAGAAG AGGTGGAAAG GGCGCTGAGG
GAGATTGAGG GTGTGCTTGA AGCCGTGGTG GCGCCCGTGC GGGACCCCGA ATATGGAGAG
CGTCCGGCGG CATTTATCCG TACTGCCGGA GGAGACGGCC CTGACGACGA AACCCTCCGC
CGCGAAATGC AGATGCGGGT CGGCCGTCTG AAAACGCCGG TGGTGTTTTT CCGGGTGTGC
CAGTGGACAA CGCTTCCGGG ATCGGAAAAG ACGGATCGGG CCTGGTATAG GCAGATGGCT
GCGGAGTACC GCCGGGGAGA GTCTAGCGGC GGGCTGCCTT GCGCTTGA
|
|---|
| Protein sequence | MDPLRSPAPD PVADAASRFG PMPMLLTPDG SRSFKECSAM AGRIAAALLN RGLRDGDGVA
IISPNTPDMV LILLALLSAG MVAAPLNHRL PEARLRQMLQ ELQPSLCITG AECPAPDTDT
ASIDAAELLA EASALPDRRS ALLNHKGTTV RPITIIHTSA STGTAKAAVH SLENHWYNAL
GSNSNLPFGP GDTWLLSLPL FHVGGYALIF RSLASGGALA IDRPHASLTD SLERFPISHL
SLVPTQLFRL LYRENDPALT AGIKALLLGG SAASGSLVDE AAARGLPIYL SYGSTEMASQ
IATTDAPVAR HRSDSGRVLP WREVREAPDG ELLVRGKCLC TGYLRNGAID PIGDPDGWFH
TGDIGSLAAD GTVRVLGRKD DMFISGGENI HPEEVERALR EIEGVLEAVV APVRDPEYGE
RPAAFIRTAG GDGPDDETLR REMQMRVGRL KTPVVFFRVC QWTTLPGSEK TDRAWYRQMA
AEYRRGESSG GLPCA
|
|---|
| |