| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_0315 |
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| Symbol | metH |
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| ID | 3746180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium luteolum DSM 273 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007512 |
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| Strand | - |
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| Start bp | 322445 |
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| End bp | 326122 |
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| Gene Length | 3678 bp |
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| Protein Length | 1225 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637768353 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_374246 |
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| Protein GI | 78186203 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000170465 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGGCAA CACTCAGAGA GCTCCTCAGA GAGCGCATCC TCGTCCTCGA CGGCGCCATG
GGCACCATGA TCCAGCGCCA CAAACTAACC GAGAACGACT ACCGGGGCGA ACGCTTCAAG
AGTCACACCC ACCCGCTCCT CGGCAACAAC GACATCCTGG TGCTGACCCG TCCCGACATC
ATATACCAGA TCCACTGCGA CTTCCTCGAA GCGGGTTCCG ACATCATTGA AACCAACACG
TTCAACGCCA ATCCTATTTC TCAGGGCGAC TACGGAACCG AAGATCTCAT CAAGGAACTC
AACCTCGAAG CATCAAGACT CGCACGGAAA GCCGCCGACA GTTACACCGC AAAAGACCCC
GCAAAGCCCC GGTTCGTTGC TGGATCAATC GGCCCGACAA ACAAGACCCT TTCGCTCTCT
CCCGATGTCA ACAACCCCGG CTACCGGGCG GTAAGCTTCC GCGATGTGGT GGACAACTAC
CTCCTGCAGC TCGAAGGGCT GATGGAGGGT GGCGTGGATG TGCTGCTCGT CGAAACCGTC
TTCGATACCC TCAACTGCAA GGCAGCTCTT TTTGCCATAG AAGAATTCTT CACCCGGACC
AATAAGCGCG TCCCCGTCAT GGTCTCCGGA ACCGTCGTCG ACCAGAGCGG CCGCACTCTT
TCCGGCCAGA CCACCGAAGC CTTCTGGATC TCGATCGCCC ATATGCCGGA TTTGCTCTCG
GTCGGCCTGA ACTGTGCGCT CGGCTCCAAA CAGATGCGCC CGTTCATCGA GGCGATCTCC
ACCGTTGCTG AAAGCTTCGT CAGCGTATAC CCGAACGCCG GTTTGCCGAA CGAGTTCGGC
GAATACGACG ACTCCCCCGA ATATATGGCG GACCAGATTG CCGGCTTTGC TGAATCAGGG
TTCGTCAACA TTGTCGGCGG CTGCTGCGGC ACCACGCCCG GCCACATCAA GGCCATCGCC
GATGCCGTAG TGGCACTCCA GCCGAGAAAA CGGCCGACGG CGTCGCATGA GCTCCAGCTC
TCCGGCCTTG AACCACTCCG GGTCAACTCC ACCACCGGGT TCATCAATGT CGGCGAGCGG
ACCAACGTCA CCGGCTCGAA AAAGTTCGCC CGCCTTATCC GTGAGGGCAA TTACGACGAA
GCCCTCTCCA TCGCCCGCCA GCAGGTTGAA AGCGGCGCAC AGGTGATTGA CGTCAATGTC
GACGAAGGAA TGCTTGACAG TGAGAAGGTG ATGCAGGAGT TCCTGAACCT CATCGCCTCG
GAACCTGAAA TCGCCAAGGT CCCCGTCATG ATCGACAGCT CGAAGTGGTC GGTCATCGAA
AAAGGGCTTC AGTGCGTCCA GGGCAAGAGC ATCGTCAACT CCATCAGCCT CAAGGAGGGC
GAAGAACCCT TCCGCCAAAG AGCCGCGAAG ATCCTTGAAT ACGGTGCGGC AACCGTGGTC
ATGGCCTTCG ACGAAGCAGG TCAGGCCGAC AGCCTGGAAC GCAGGAAAGA GATCTGCGGG
CGTGCCTACC GCATCCTCAC CGAGGAGGTC GGTTTCCCTC CCGAAGACAT CATTTTCGAC
CCCAACGTAC TCACCGTCGC CACCGGCATC GAAGAACACG ACACCTACGC CCTCGACTTC
ATCGAAAGCG TTCGCTGGAT CAAGGAGAGC CTCCCGCACG CAAAAGTGTC GGGAGGCATC
AGCAACGTCT CATTCTCCTT CCGTGGAAAC GAGCCGGTGC GGGAAGCCAT GCACGCCGCA
TTCCTTTACC ATGCCATTCA GGCCGGGCTT GACATGGGCA TCGTCAATGC CGGCCAGCTC
GCCATCTACG AAGACATCGA CCCCGAACTG TTGGTCCGCG TCGAAGACGT GCTCCTCAAC
CGGCGCAGTG ATGCCACCGA ACGTCTCGTC AGCTTTGCAG AAACCATTCG GGACGGTGGA
GAAAAAACAG AGGCAAAAGC CGCAGAGTGG CGCTCGCTGC CAGTCGTCGA ACGTCTCCGT
CACGCCCTCA TCAAAGGCAT CGTCGAGTAT ATCGACGAGG ACACAGAAGA GGCCCGCAAA
CTTTACCCCA GCCCGCTGCA GGTTATCGAA GGCCCGCTCA TGGACGGCAT GAACGCCATC
GGCGACCTCT TCGCCGAAGG CAAGATGTTT CTTCCGCAGG TGGTCAAGAG CGCCCGCGTC
ATGAAACGCT CGGTCGCCTG GCTCATCCCC TTCATCGAAG AGGAGAAGGC CCGCAACAAA
GACACCAAAG CCGCAGCGAA GATCCTGCTC GCCACCGTCA AGGGCGACGT GCACGACATC
GGCAAGAACA TCGTCTCCGT CGTTCTCTCC TGCAACAACT ACGAGGTAAT CGACATCGGG
GTGATGATGC CCTGTGAAAA GATCCTCGAG GCAGCCGTGC GCGAAAAAGC CGACATCATA
GGCCTCAGCG GACTCATCAC CCCGTCGCTT GACGAAATGG TGCATGTCGC CAAAGAAATG
GAGCGGCTCG GCATGAAGAT CCCGCTCATC CTCGGCGGAG CCACCACCTC GAAAATCCAC
ACCGCGGTAA AAATCGCTCC GGTCTACTCC GGACCCGTCG TCCAGGTGCT CGACGCCTCA
CGCAGCGTAC CCGTCGCCGG CAGCCTGCTC AACCCGCAGC TGAAAGAGGG ATATGTGGCC
AAACTGAAGG ATGAACAGGA AGCAATGCGC CTCGGCCATG CCGAAAGAAG CGCGGCCAAG
CGCTTCGTCA GCGTTGAAGA GGCCCGCAGG AACCGCCTCC GTCCGGACTG GAACGCAACG
CTCCCCCCTC TGCCGAAAAA GCCCGGAACA ACGGTGCTTG ACAACGTCAC TGCCGGAGCG
CTCCGCCCCT ACATCGACTG GACTCCGTTC TTCCAGACCT GGGAGTTGCA CGGCCGTTAT
CCTGAAATCC TCTCCGACCC CAAGGTCGGG GCTGAAGCCA CAAAGCTCCT CGGGGACGCC
AACGCCATGC TTGACCTCAT CGAGAAAGAA AAGCTGCTCG GCATCCGTGG CGTTGCAGGC
CTCTTCCCGG CCGCAAGTGC GGGAGACGAC ATCGAAGTCT ACACCGATGA AACGCATACG
GCAGTCCTGG CGACCATCCA TACCCTGCGC CAGCAGCAGG AAAAACCCGC AGGAGAACCG
AACCTTGCCC TGGCCGACTT TCTGGCACCT AAAGAGAGCG GCCTTAAAGA CCACATCGGA
GGATTTGCCG TAACCACCGG TCTCGGCATC AAACCCATCC TCGAACGATA CCGGGGTATG
CACGACGACT ACAGCGCAAT CCTCCTGCAG GCGCTCGCCG ACCGGCTTGC AGAAGCCTTC
GCCGAGATGC TGCATGAAAA AGTGCGCCGC GAACTCTGGG GCTACGCCCC CGCCGAAATC
CTCGGCTCGG AAGCGCTCAT CGGTGAAGAC TACCAGGGCA TCCGCCCCGC ACCCGGCTAC
CCCGCATGCC CCGACCATAC GGAAAAAGCA GGGCTTTTCA CCCTGCTCAA CGCCGAAGCC
AACACCGGCA TCACCCTCAC CGAAACCTAT GCAATGGACC CTGCCGCCTC CGTAAGCGGC
TTCTATTTCG CCAACCCCGA AGCCCGCTAC TTCGTACTCG GCAAAGTCCA GAAGGACCAG
GTGGAGGACT ATGCTGGACG CAAAGGCTTC AGCCTGCAGG ATGCCGAGAA GTGGCTCGCC
CCCAACCTCA GCTACTAG
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| Protein sequence | MKATLRELLR ERILVLDGAM GTMIQRHKLT ENDYRGERFK SHTHPLLGNN DILVLTRPDI
IYQIHCDFLE AGSDIIETNT FNANPISQGD YGTEDLIKEL NLEASRLARK AADSYTAKDP
AKPRFVAGSI GPTNKTLSLS PDVNNPGYRA VSFRDVVDNY LLQLEGLMEG GVDVLLVETV
FDTLNCKAAL FAIEEFFTRT NKRVPVMVSG TVVDQSGRTL SGQTTEAFWI SIAHMPDLLS
VGLNCALGSK QMRPFIEAIS TVAESFVSVY PNAGLPNEFG EYDDSPEYMA DQIAGFAESG
FVNIVGGCCG TTPGHIKAIA DAVVALQPRK RPTASHELQL SGLEPLRVNS TTGFINVGER
TNVTGSKKFA RLIREGNYDE ALSIARQQVE SGAQVIDVNV DEGMLDSEKV MQEFLNLIAS
EPEIAKVPVM IDSSKWSVIE KGLQCVQGKS IVNSISLKEG EEPFRQRAAK ILEYGAATVV
MAFDEAGQAD SLERRKEICG RAYRILTEEV GFPPEDIIFD PNVLTVATGI EEHDTYALDF
IESVRWIKES LPHAKVSGGI SNVSFSFRGN EPVREAMHAA FLYHAIQAGL DMGIVNAGQL
AIYEDIDPEL LVRVEDVLLN RRSDATERLV SFAETIRDGG EKTEAKAAEW RSLPVVERLR
HALIKGIVEY IDEDTEEARK LYPSPLQVIE GPLMDGMNAI GDLFAEGKMF LPQVVKSARV
MKRSVAWLIP FIEEEKARNK DTKAAAKILL ATVKGDVHDI GKNIVSVVLS CNNYEVIDIG
VMMPCEKILE AAVREKADII GLSGLITPSL DEMVHVAKEM ERLGMKIPLI LGGATTSKIH
TAVKIAPVYS GPVVQVLDAS RSVPVAGSLL NPQLKEGYVA KLKDEQEAMR LGHAERSAAK
RFVSVEEARR NRLRPDWNAT LPPLPKKPGT TVLDNVTAGA LRPYIDWTPF FQTWELHGRY
PEILSDPKVG AEATKLLGDA NAMLDLIEKE KLLGIRGVAG LFPAASAGDD IEVYTDETHT
AVLATIHTLR QQQEKPAGEP NLALADFLAP KESGLKDHIG GFAVTTGLGI KPILERYRGM
HDDYSAILLQ ALADRLAEAF AEMLHEKVRR ELWGYAPAEI LGSEALIGED YQGIRPAPGY
PACPDHTEKA GLFTLLNAEA NTGITLTETY AMDPAASVSG FYFANPEARY FVLGKVQKDQ
VEDYAGRKGF SLQDAEKWLA PNLSY
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