| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_0054 |
|---|
| Symbol | |
|---|
| ID | 3745818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | - |
|---|
| Start bp | 56993 |
|---|
| End bp | 58612 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637768081 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_373987 |
|---|
| Protein GI | 78185944 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCG CAGCAGCACA CCCGTCCAGC ATGCCCTCCG TCGCGAACGG CTCAGAGGCG
CATGCCTATG AAACCGGCGT ACGCCGTACC ATCATCACCT TGACGGTGAT TGTGGCGGCC
ATGCTGGAAT TGATCGACAC CACCATCGTC AATGTGGCAA TCAACCATAT CAGCGGCAAC
CTCGGCGCAA GCATCGAGGA TGTCTCATGG GTGGTGACGA GCTACGCCAT CGCCAACGTG
ATCGTCATCC CGCTCTCGGG GTTCCTTGGC AATCTGCTCG GCCGGAGAGC CTATTTCATC
GGATCCATCC TGCTCTTCAC TCTGGCTTCG CTGCTCTGCG GCCTCGCCGA CAACATCTGG
ACGCTGGTCT TTTTCCGCTT CCTGCAGGGC ATCGGCGGCG GTGCCCTCCT GCCGACCTCC
CAGGCGATCC TCTATGAAAC CTTCCGACCA GAGGAACGGG GCGCGGCGAC CGGCATCTTC
TCCATGGGCC TCGTACTCGG CCCCACCATC GGCCCGCTGC TCGGAGGCTA CCTCGTGGAC
TACTTCAGCT GGGAATGGTG CTTTTTCGTC AACATCCCGG TAGGCCTTCT TGCCGCATGG
TCGGCATTCA CATTCATCCG GGAACCGAAG GTCCGCCACA AGGTACAGAA GATCGACTGG
ACCGGCATCG GGCTGCTCGC CGCCGGCATC GGTTCGCTGC AGTTCATTCT TGAACGCGGC
CAGTCGAAGG ACTGGTTCGA TACCCCATAC ATCACCTGGT TCACCCTCAT CGCCCTCACC
TCGCTCGTGG CATTCGTCTG GTGGGAGCTG CATACTGAGC ACCCGGCAGT CGACCTCAGT
GTGCTATCAC GCAGCAAGAA CCTCGCAATC GCCGCCGTAC TCACCTTCAT TGTAGGCTAC
GGCCTCTACG GCTCGCTGTT CGTCTTTCCG GTGTTCGTGC AGCGCCTGCT CGGGTTCACC
GCGGTGCTGA CAGGGCTCGT GCTGTTCCCA AGCGCCATGC TGACAGGCGC CATATCGCTC
CCGCTCGGCA TTGCCCTGCA GAAAGGCGCA TCTGCGAAAC TGATGATGGC TTTCGGCATG
GCGGCCTTCA TGGTGTTCTC CTGGGAACTT GGACAACAGA CCCTGCAATC GGGAGCGGAG
AACTTTTTCG CTGTGCTGTT GCTGCGCGGC CTGGCGCTCG GATTCATCTT CATTCCAGTC
ACCATGCTCG CCGTCACCGG CCTGCACGGG CGCGACATCG GACAGGCGAC CGGACTGAAC
AACATGGTCC GCCAGCTCGG AGGGTCATTC GGCATCGCCA TTACCAACAC CTATGTGGCA
CAGCGGGTCG CCGCACACCG GGTGGAACTC GCAGGCCACA TGTCAGCGTA TGATTCCGCT
GCGCTTGAAC GCCTGGAGGC CATTAAACAG GCAGCCGGAG CACGGGCAGC TCTCTCCCCT
GCCGATGCCG AGAACCTTGC CAACCGTGCG CTTGAGGGCA CCGTGATGGC CCAGAGCTAC
CACCTTGCCT ACATGGATGC CTTCATGCTG ATAGCCGTTT TGTTCCTCTG CAGTCTACCC
CTCCTGCTCT TCATCAGGGA GAAAAAGGGT GACCAGGGAC ATGCCCCGGA AGCTCACTGA
|
|---|
| Protein sequence | MKSAAAHPSS MPSVANGSEA HAYETGVRRT IITLTVIVAA MLELIDTTIV NVAINHISGN
LGASIEDVSW VVTSYAIANV IVIPLSGFLG NLLGRRAYFI GSILLFTLAS LLCGLADNIW
TLVFFRFLQG IGGGALLPTS QAILYETFRP EERGAATGIF SMGLVLGPTI GPLLGGYLVD
YFSWEWCFFV NIPVGLLAAW SAFTFIREPK VRHKVQKIDW TGIGLLAAGI GSLQFILERG
QSKDWFDTPY ITWFTLIALT SLVAFVWWEL HTEHPAVDLS VLSRSKNLAI AAVLTFIVGY
GLYGSLFVFP VFVQRLLGFT AVLTGLVLFP SAMLTGAISL PLGIALQKGA SAKLMMAFGM
AAFMVFSWEL GQQTLQSGAE NFFAVLLLRG LALGFIFIPV TMLAVTGLHG RDIGQATGLN
NMVRQLGGSF GIAITNTYVA QRVAAHRVEL AGHMSAYDSA ALERLEAIKQ AAGARAALSP
ADAENLANRA LEGTVMAQSY HLAYMDAFML IAVLFLCSLP LLLFIREKKG DQGHAPEAH
|
|---|
| |