| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_0050 |
|---|
| Symbol | |
|---|
| ID | 3745814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | + |
|---|
| Start bp | 53176 |
|---|
| End bp | 54579 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637768077 |
|---|
| Product | uroporphyrin-III C-methyltransferase-like |
|---|
| Protein accession | YP_373983 |
|---|
| Protein GI | 78185940 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.929104 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCCA GCAAGCAACC TCTGAAGTAC CCCGATATGA AAAAGAAAGA CCAGCAGACG
AAGGGATATG TCTACATCAT CGGCGCCGGT CCCGGCGACC CCGATCTCCT CACCCTCAAG
GCCGAACGCG CACTCCAGGC GTCCGACGTG ATCCTCTATG ACGATCTGGT CACGAGCGCA
CTCGTCGATC GGTTCGAGGG GCTGAAGATC TATACCGGCA AGCGCAAGGA CAGCCACCAC
TTCGAGCAGG ACGCCATCAA CGAGGAGATT GTCCGCCACG CTCTGCGCGG CAAGACCGTC
GCCCGTCTTA AGGGAGGCGA TCCGTTTGTT TTCGGGCGCG GGGGCGAGGA GATCGACGTT
CTCCGCCAGC ACCGCATCGA CTATGAGATC ATCCCCGGCA TCACGGCCGC GCACGGGGCG
AGTTCCTACA GCGAAATCCC GCTCACCATG CGGAAGGTAT CCTCGTCGGT CGCGTTCTGT
ACCGGCCATC CCATCAACAA GATCCAGGCG CCAGATGCCG ACACGCTGGT CTACTACATG
GTGGCATCGT CCGTTCATGC AGTGCTCGAG GCCGTTCTGA AAAAAGGGCG AAGCGAGTCA
ACGAAGGTGG CCATCGTCCA GAACGCCACC CGATACAACC AGCAGGTCTT TACTGGTACC
ATCGGTGAGT TCCTGCGGCG CGACAGGGTT GCATATTCTC CTGCCCTGCT CATCATCGGT
GAGAACATCA ACCACTTCAT AGAGGAAAAC TGGTACTCAC GCAAGAAGAA GGTGCTTACG
GTCGGCGGCG AGCCCGCCCA ATTCAGCAGT CGGGAATATG TGCGGGTCAA CTTCCCCTGC
CGGAGGGAAG AGGCTGCCGA GCGCAGCGTG CTCGAGGAGT GTTTCCATGG CATCGGCGAC
TGGCCGGTCG TGTTCTTCCC GAACCGCTTT GCCGTCAAGT ATTTCTTCGG CTACCTGATG
GAGTTCGGTC GCGACGTACG TCACCTTGCG GGCGCCCGCA TCTGCACCCT CGGCCGTCCG
GCGGCCACGG AGCTTCAGAA GTACGGAGTC CTCAGCGACC TCGTACTTGA GCCCGAAAGC
CCGTCGGCCA TCGCCGGCAT GCTGAGGGAC GGGGGTATCT GCAACGATCG GGTGCTTCTT
CCCGGCTCGA ACCTCGTTGA CAGCTACCTC GTCAACGCCC TTGAGGAAGA GGGCAATACG
GTCACTCCGC TGTCGGTCTA CCTGCACGGC AAGCATGAGC AGGAGGAGAG CATCGACCTG
GACTTCATCG ATGAAATCTG GTTTTCCTCG CCCTCATGCG TGAAAAACTT CAGCGCCCTC
TACCGGAGCA TCCCGGAGAA CATCACGGTG ACGACGGCTG ACGTGGAAAC CGCAGCGGAA
TACGCCCGCC TGTTTGGCAG CTGA
|
|---|
| Protein sequence | MSPSKQPLKY PDMKKKDQQT KGYVYIIGAG PGDPDLLTLK AERALQASDV ILYDDLVTSA
LVDRFEGLKI YTGKRKDSHH FEQDAINEEI VRHALRGKTV ARLKGGDPFV FGRGGEEIDV
LRQHRIDYEI IPGITAAHGA SSYSEIPLTM RKVSSSVAFC TGHPINKIQA PDADTLVYYM
VASSVHAVLE AVLKKGRSES TKVAIVQNAT RYNQQVFTGT IGEFLRRDRV AYSPALLIIG
ENINHFIEEN WYSRKKKVLT VGGEPAQFSS REYVRVNFPC RREEAAERSV LEECFHGIGD
WPVVFFPNRF AVKYFFGYLM EFGRDVRHLA GARICTLGRP AATELQKYGV LSDLVLEPES
PSAIAGMLRD GGICNDRVLL PGSNLVDSYL VNALEEEGNT VTPLSVYLHG KHEQEESIDL
DFIDEIWFSS PSCVKNFSAL YRSIPENITV TTADVETAAE YARLFGS
|
|---|
| |