| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B3158 |
|---|
| Symbol | |
|---|
| ID | 3754925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 3561460 |
|---|
| End bp | 3563073 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637768005 |
|---|
| Product | glucose-methanol-choline oxidoreductase |
|---|
| Protein accession | YP_373912 |
|---|
| Protein GI | 78064004 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACTC AAGACCTGAC CTTCGATTAC GTCGTCATCG GCGCGGGTTC CGCCGGTTGC
GTCGTGGCCG CGCGGCTGAT CCAGCAGAAC GCCGGTTCGG TGCTGCTGCT GGAAGCCGGC
ACGCGCGACG ACAATCCGTT TCACCGGATT CCGGGCGGCG TGATGCAGGT GTTCCAGAAG
AAATCGTGGC CCTACATGAC CGAACCGCAG CCGAACGCGA ACGGCCGCAG CATGATCATC
GCGCAGGGCA AGGTGCTGGG CGGCGGCAGT TCGGTCAACG GGATGATCTA TATCCGCGGG
CAGCGCGAGG ACTACGACGA CTGGGCGACG CAGTGGGGAT GCACGGACTG GCGCTACGAC
GACGTGCTGC CGTATTTCAT GAAGGCGGAA GCGAACGAAA GCCTGGGGCC CGCGTATCAC
GGCCAGACCG GCCCGCTGCC CGTCAGCGAG AACCGCTATC GCCATCCGTT GACGGCCGCG
TTCATCCGGG CCGGGCAGGA AATGGGGCTG CGCTACGTCA ACGACTTCAA CGGCGAAGTG
CAGCAGGGCA TCGGCTATTA CCAGACGACG ACGCGCAACG GCGAACGTGC GAGCACCGCA
CAGACCTATC TGGCGTCGGT GCGCAACGAC GCGAAGCTGA AGGTGGTGAC CGGCGCACTC
GTGCACCGGA TCCGGACCGA TGCGGGGCAC GCGGTCGCGG TCGAATTCAG CGAAGGCGGA
AATGCGCCCG TGTCGGTGCG TGTGCGCAAC GAGGTCGTCG TGAGCGCGGG GGCAATCGGG
AGTCCGAAGG TGTTGATGCT GTCCGGTATC GGGCCGGCGG AGCATCTCGC TGCGCTCGGG
ATCGATCCGG TTGCCGCGTT GCCGGTCGGC CAGAACTTCC ACGATCATCT GCACATGTCG
GTGCAGGCGT CGATTCGCAC GCCGGCGAGC CTCTATGGCG AGAACACGGG GTTCCGGGCG
ATGCGCCATT TCCTGCAATG GAAGTGCTTC AGGAGCGGGC TGCTGACCAG CAACATCCTC
GAAGGCGGCG CATTCATCGA TACGCTGGGC ACGGGGCGGC CGGACGTTCA GTTCCATTTC
CTGCCGCTGC TCGACAATTT CGACAATACG CCGGGAGAGA AGCCGCCCGC GAGCGAGCAC
GGCATGTCGG TCAAGGTCGG CCATCTGCAA CCGAAATCGC GCGGGCAGGT GGGGTTGCGC
AGCAAGGATC CGGCGGACCT GCCGAGGATC GACGCGAACT TCCTGAGCGA CCCGGCCGAC
CTCGACGGTC AGATCCGGGC CGTTCAGGCC GGGCTCAGGA TCCTGTCGGC GAAGGCACTG
CAGGCGCACG TGAAGGAAAT CGTCGCGCCG GCCCGGATCG ATCCGGACGA TCTGCCGGCG
ATCGAGCGAT TCGTGCGGCA GGACATCAAG ACCGTCTATC ACCCGGCCGG CACTTGCAGG
ATGGGCGCGG ACCCGCGCAC GTCGGTGGTG GACCAGAAGA CGCTGCGCGT GCACGGCTTC
TCCAATCTGC GCGTGATCGA CTGCTCGATC TGTCCGCAGG TGCCGAGCGG GAATACCAAT
GCGCCGGCGA TCATGATCGG CGAACGCGGC GCCGATCTGC TGCTCGGTCG ATGA
|
|---|
| Protein sequence | MTTQDLTFDY VVIGAGSAGC VVAARLIQQN AGSVLLLEAG TRDDNPFHRI PGGVMQVFQK
KSWPYMTEPQ PNANGRSMII AQGKVLGGGS SVNGMIYIRG QREDYDDWAT QWGCTDWRYD
DVLPYFMKAE ANESLGPAYH GQTGPLPVSE NRYRHPLTAA FIRAGQEMGL RYVNDFNGEV
QQGIGYYQTT TRNGERASTA QTYLASVRND AKLKVVTGAL VHRIRTDAGH AVAVEFSEGG
NAPVSVRVRN EVVVSAGAIG SPKVLMLSGI GPAEHLAALG IDPVAALPVG QNFHDHLHMS
VQASIRTPAS LYGENTGFRA MRHFLQWKCF RSGLLTSNIL EGGAFIDTLG TGRPDVQFHF
LPLLDNFDNT PGEKPPASEH GMSVKVGHLQ PKSRGQVGLR SKDPADLPRI DANFLSDPAD
LDGQIRAVQA GLRILSAKAL QAHVKEIVAP ARIDPDDLPA IERFVRQDIK TVYHPAGTCR
MGADPRTSVV DQKTLRVHGF SNLRVIDCSI CPQVPSGNTN APAIMIGERG ADLLLGR
|
|---|
| |