Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B2947 |
Symbol | |
ID | 3754714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | - |
Start bp | 3332830 |
End bp | 3333867 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637767795 |
Product | histone deacetylase superfamily protein |
Protein accession | YP_373702 |
Protein GI | 78063794 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.367372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCACGG TCTACAGCAG CGATCACCAA CTGCATCGCG GCGTCGAATT GAAGGACGGC GCGATCACCG ATTCGTTCGA AAACCCCCTT CGCGCCGAAA CGGTGCTTGC GCAGGTGCGT GCCGCCGGTC TCGGCGACGT GATCGCGCCG AAACCGTTCG ACCGCGCCCA CTACGCGGCC GCGCACAGCG CGCGCTACGT CGATTTCCTC GCCGGCGCGT GGGACGAGTG GACCGCGACG GGCCGCACCT GCCAGGCGCT GCCGCTCGTG TGGCCGGTGC GCGCGATGCC GGCGGCCGCG ACGCCGCCCG CGTTCATCGA CGGCAAGCTC GGTTTCTACG CGATGGACGC CGGTGCGCCG ATCAACGCCG GTACGTGGGA TGCCGTGAGC GCGAGCGCGA ACTCCGCGCT CACCGGTGCC GACCTGCTGT CGAGCGGTGC AACGCGCGCG GCGTTCGCGC TGTGCCGCCC GCCCGGCCAT CACGCGGGCC GCGAGTACAT GGGCGGCTAT TGCTACCTGA ACAACGCGGC GATCGCCGCG CAGCACTGCG TCGCGCAAGG CGCGGCACGC GTCGCGGTGC TCGACGTCGA TTTCCACCAC GGCAACGGCA CGCAGGACAT CTTCTACGAC CGCGCGGACG TGTTGTTCGC GTCGATCCAC GGTGAGCCGC CGGTGTCGTA CCCGTACTTC TCCGGCTACG CGGACGAGCG CGGCATCGGC GCGGGCGAAG GGTTCAACCT GAACCTGCCG CTGCCGAAGG GCACGCTGTG GGATACCTAC TCGGCGGCGC TCGATCACGC GGCCACCGCG ATCGCCGCGC ATGCACCCGA CGCGCTCGTC GTCTCGCTCG GCGTCGACAC CTTCGAGCAC GACCCGATCA GCCACTTCCG GCTGCGTTCG CCCGACTACC TGCGCATCGG CGCGGCGCTC GCGCGCCTGA ACGTGCCGAC GCTGTTCGTG ATGGAAGGCG GCTACATGGT CGACGAGATC GGCATCAATG CGGTCAACGT GCTGCTGGGA TTCGAAGGGC GCGCGTAA
|
Protein sequence | MLTVYSSDHQ LHRGVELKDG AITDSFENPL RAETVLAQVR AAGLGDVIAP KPFDRAHYAA AHSARYVDFL AGAWDEWTAT GRTCQALPLV WPVRAMPAAA TPPAFIDGKL GFYAMDAGAP INAGTWDAVS ASANSALTGA DLLSSGATRA AFALCRPPGH HAGREYMGGY CYLNNAAIAA QHCVAQGAAR VAVLDVDFHH GNGTQDIFYD RADVLFASIH GEPPVSYPYF SGYADERGIG AGEGFNLNLP LPKGTLWDTY SAALDHAATA IAAHAPDALV VSLGVDTFEH DPISHFRLRS PDYLRIGAAL ARLNVPTLFV MEGGYMVDEI GINAVNVLLG FEGRA
|
| |