| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2939 |
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| Symbol | |
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| ID | 3754706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | - |
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| Start bp | 3321883 |
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| End bp | 3325230 |
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| Gene Length | 3348 bp |
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| Protein Length | 1115 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637767787 |
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| Product | outer membrane autotransporter barrel |
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| Protein accession | YP_373694 |
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| Protein GI | 78063786 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.988742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.687954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA CGACGCGGAA CCTGGGTTTG GGCGGAGTGG CGATCCTGAC CGGCGCGATG
CCGGTGGGGG CCTATGCGGC ATGTATCCCG GCTGCACCAC CGGGCAGCGG CACGACGGTC
ACGTGCTCCG GTGCCGGCAT CCCGTCGGTC ATGGCCGCGA CCGGCAGCAC CGGCGTGACG
ATCAATATCA ATGCAGGCGC GACGGGCAGC TACGTGCTCA CGTCCACGCC GACACCGTTC
TCCGTCGATA CCCAGAGCGC GATTACCAAC AACGGCAACC TGTCGATGTC CGGCAACGGC
ACGGGCGTCG CGAATCGCGG CGCGGTGCTG CTCGGCGTGA ACAACGGCAA CACGCTGACC
AATGCCGCTC CGGGCGTGAT CTCGACGACC GGCGCCTACA ACGACGGGAT GGCCGCGAAC
GGCAACAACA ACACGCTCGT CAACAACGGT TCGATCACGA CCACCGGCAA CAACTCATAC
GGGATGACGG CCGCGTGGGG GCAAAGCAAC CCCGGCGCGT CGGGCAACCA GATCGTCAAC
ACGGGCACCG TGACGACATC GGGCAACAAC GCGCGCGCGG CGTCGCTGCT CGGCGGCAAC
GGCACGATTA CCAACAGCGG CACGCTGACG TCGAACGGCC GCGATGCACC GGCCGTATAC
ATGCAGGGCA ACAACGACAC GCTGGTCAAC AGCGGCACGA TCCAGACGAC CGGCACCGCG
ACGAGCGGCG GTAGCGTCGA TGCGGTCGTG TCGAATACGC TTGGCAGCTC GTTCACCGCG
ACGATCACGA ACCAGGCCGG CGGCAAGATC ATCAGCAACA ACGGGATCGG GGTGCGCTCG
ACCAACGGCG CGACGACGAT CACCAACGCG GGCCTGATCC AGGGTGGCGG CGGCACCGCG
ATCCAGGGCG GCAATGGCAA CGTGACGCTG ATCCTGCAGA CCGGCTCGCA AATCGTCGGC
ACCGCGAATG GCGGCGCCGG CACCAACACC GTGACGCTGC AGGGCACGGG CACGGCGTCG
AATGCATTCA CGAATTTCCA GAGCCTGACG ATGACTGGCG CCGACTGGAC GTGGGCCGGC
ACCGGCACGT TCTCGACCGC GCTCGTGCAG AGCGGCACGC TGAACCTCAC GGGCACGCTC
GGCACGACCA CGGCGTCGGT CGTGGCCACG GTCAATGCGG GCGCGACGCT GCAGGCGAAT
GCGTCGAACC TGCCGTTGTC GGTGACCGAC AACGGGCTCG TGCGTTTCCA GCAGGACAGC
GCCGGCACGT ACACGGGCAC GATCAGCGGG GCGGGCGCAG TGGAGAAAAC CGGTGCGGGC
ACGCTGACGG TTACGCCCGC GGCTGCGGGC GGCAACACGT ATTCCGGCGG CACGACGATC
ACGCAAGGCA CGCTGTCGGT CGCGGCGGAC AACGCGCTCG GCGCGGCGTC GGGCGGGCTC
ACGTTCAACG GCGGCACGCT GCAGCTCGGC AGTTCGTTCA ATCTGGCGTC GGGCCGCGCG
GTGTCGATCA CGCCGTCAAG CAGCGGCACG ATCGATACGC AGGGTTTCAA CACGACGTTG
ACGCAGAACA TCGCGGGTGG CGGAGGTTCC CTGACCAAGC TCGGCAGTGG CACGTTGACG
CTGAACGGCC CCAGCAACGC CATGGGCTTC ACCGACATCA AGGCTGGAAC GCTGGTGCTC
GGCGATGGAC TCGGCGGACC GGCCACGATG ACCGGGGGTG GCATGGTGAG GATCGAGCCG
GGTGCGACAT TCGGCGGTTA CGGCAGTGTG GCGGGCGACG TAGTCAACTA TGGCACGGTT
TCTGTCGCGA ACGCGTTGAG TGGTCTCGCG AGCGGTCACA CCGGCAACCT GGAAATCAAG
GGAGATCTGA CAAACGCGGG GCTCTTGCAA CTGGGCGGCA GCGGCGTCGG CAATACGCTG
ACGATCATCG GCGGCGGCTA CTCGGGCCAG AGCGGGACGG TCGCGGTGAA TACGTATCTG
GCGGGAGACG GGGCGGCTTC GGACCGGCTG ATCGTCGGCG CTGGCGGGAT CGACGGCTCG
AGCATGCTGA AGGTGACAAA CGTCGGCGGC CCCGGCGCGC AGACAACGGG CGATGGTATT
GAGGTCGTAC AGGTGACCAA CGGCGCGACG TCGAGCGCGG GCGCGTTTTC CCTGTCCGGA
GGGACGGTGA GTGCTGGTGC ATATTCGTAC TTCCTTGCGA AAGGCGGCGC GGCGACCGGC
ACCGGCGACA ACTGGTACCT GCGCAACACG GTGCCGCCGA AACCGCAGCC GCCGGTCGTC
GAGCCCGGCC AGCCGACCCC ACCGACCGAG CCGCCGATCA CGCCGGCCGA AGGCACGCCG
GAATCGATCG TCGAGGCCGT CGACAACGCG GGAACGGGCG GCAATGCCGA GCCGATCTAC
CGGCCCGAAG TGCCGCTGTA CGCGGAAGCG CCTGCTGTCG CACGCCAGCT CGGGCTGCTG
CAGATCGACA CCTTCCACGA CCGCCAAGGC GAACAGGGCT TATTGGCCGA GAACGGTTCG
ATACCCGCAT CGTGGGCGCG CGTGTGGGGC GGCCACAGCG ACATCAAGCA GAAGGGCGAC
GTGACACCGT CATACGACGG CACGGTGTGG GGGATGCAGG TCGGGCAGGA TCTGTACGCG
GACACCACCG CGAGCGGCCA TCGTAACCAC TACGGCTTCT TCCTTGGGTT CTCACGCGCG
GTCGGCGACG TGAACGGCTT CGCGCTCGCG CAGCAGGACC TGGGCGTCGG CTCGCTGCAG
GTCAATGCGT ACAACCTCGG CGGCTACTGG ACGCACATCG GCCCGGGCGG CTGGTACACC
GATGCCGTGC TGATGGGCAG CGCGCTCACG GTGCGCACGC ATTCGACCGA CAACGTCGGC
GGCTCGACGA ACGGCAACGC GTTCACGGGT TCGGTCGAGG CCGGGTTGCC GATCGCGCTC
GGCTACGGGC TGACGCTGGA GCCGCAGGCG CAGCTCGTGT GGCAATGGCT GTCGCTCGAC
CGCTTCAACG ACGGGATCTC GAGCGTGAGC TGGAACAACG GCAACACGTT CCTCGGCCGG
ATCGGCGCGC GGCTGCAATA TGCGTTCGAG GCGAACGGCG TGAGCTGGAA GCCGTACCTG
CGCGTAAACG TGCTGCGCTC GTTCGGCACC GACGACCGGA CTACCTTCGG CGGCTCGACG
ACGATCGGCA CGCAGGTCGG GCAGACGGCC GGACAGATCG GCGCGGGGCT CGTGGCGCAA
CTGACGAAGC GCGGCAGCGT GTATGCGACG GTCAGCTACC TGACGAACCT CGGCGGCGAG
CACCAGCGCA CGATCACCGG GAATGCGGGC GTGCGGTGGG CGTGGTGA
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| Protein sequence | MKRTTRNLGL GGVAILTGAM PVGAYAACIP AAPPGSGTTV TCSGAGIPSV MAATGSTGVT
ININAGATGS YVLTSTPTPF SVDTQSAITN NGNLSMSGNG TGVANRGAVL LGVNNGNTLT
NAAPGVISTT GAYNDGMAAN GNNNTLVNNG SITTTGNNSY GMTAAWGQSN PGASGNQIVN
TGTVTTSGNN ARAASLLGGN GTITNSGTLT SNGRDAPAVY MQGNNDTLVN SGTIQTTGTA
TSGGSVDAVV SNTLGSSFTA TITNQAGGKI ISNNGIGVRS TNGATTITNA GLIQGGGGTA
IQGGNGNVTL ILQTGSQIVG TANGGAGTNT VTLQGTGTAS NAFTNFQSLT MTGADWTWAG
TGTFSTALVQ SGTLNLTGTL GTTTASVVAT VNAGATLQAN ASNLPLSVTD NGLVRFQQDS
AGTYTGTISG AGAVEKTGAG TLTVTPAAAG GNTYSGGTTI TQGTLSVAAD NALGAASGGL
TFNGGTLQLG SSFNLASGRA VSITPSSSGT IDTQGFNTTL TQNIAGGGGS LTKLGSGTLT
LNGPSNAMGF TDIKAGTLVL GDGLGGPATM TGGGMVRIEP GATFGGYGSV AGDVVNYGTV
SVANALSGLA SGHTGNLEIK GDLTNAGLLQ LGGSGVGNTL TIIGGGYSGQ SGTVAVNTYL
AGDGAASDRL IVGAGGIDGS SMLKVTNVGG PGAQTTGDGI EVVQVTNGAT SSAGAFSLSG
GTVSAGAYSY FLAKGGAATG TGDNWYLRNT VPPKPQPPVV EPGQPTPPTE PPITPAEGTP
ESIVEAVDNA GTGGNAEPIY RPEVPLYAEA PAVARQLGLL QIDTFHDRQG EQGLLAENGS
IPASWARVWG GHSDIKQKGD VTPSYDGTVW GMQVGQDLYA DTTASGHRNH YGFFLGFSRA
VGDVNGFALA QQDLGVGSLQ VNAYNLGGYW THIGPGGWYT DAVLMGSALT VRTHSTDNVG
GSTNGNAFTG SVEAGLPIAL GYGLTLEPQA QLVWQWLSLD RFNDGISSVS WNNGNTFLGR
IGARLQYAFE ANGVSWKPYL RVNVLRSFGT DDRTTFGGST TIGTQVGQTA GQIGAGLVAQ
LTKRGSVYAT VSYLTNLGGE HQRTITGNAG VRWAW
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