| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2858 |
|---|
| Symbol | |
|---|
| ID | 3754625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 3228660 |
|---|
| End bp | 3230381 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637767706 |
|---|
| Product | pyruvate dehydrogenase |
|---|
| Protein accession | YP_373613 |
|---|
| Protein GI | 78063705 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.21878 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAC AGACGATGGC GGAATATCTG GCGAAGACGC TGGCGGCAGC GGGCGTCGAG
CGCATCTGGG GCGTGACGGG CGACAGCCTG AACGGCCTGT CGTTCAGCCT GAGCCAGATC
GGCTCGATCC GCTGGATGCA TACGCGGCAC GAGGAAAGCG CCGCGTTCGC GGCCGGCGCG
GATGCCGCGT CGACCGGGCG GCTCGCGGTG TGCGCGGGCA GTTGCGGCCC CGGCAACCTG
CACCTGATCA ACGGACTCTA CGATTGCCAC CGCAATCACC AGCCGGTGCT CGCGATCGCC
GCGCACATTC CGTCGACCGA GATCGGCCTC GGCTACTTCC AGGAAACCCA TCCACAGGAG
CTGTTCCGCG AATGCAGCCA CTTCGCGGAG CTCGTGACCA ACGCGTCGCA GTTCCCGCGC
GTGCTCGCGC GCGCGATGCG CACCGCGATC GACGAGCGCG GCGTCGCGGT GATCGTGCTG
CCGGGCGACA TCGCGCTCGG CGACGGCCCG GACGAGCTGC CGGCGTGGAG CGACGCAGCA
CCGCCGTCGA TCCTGCCGGC CGATGCCGAT CTCGACCGGC TCGCGGCGCT GCTCAATGCG
TCCGACGCGG TTACGCTGCT GTGCGGCAGC GGCACACAAG GCGCGCACGA TGAAGTGGTC
GCGCTGGCCG ATACGCTCGG CGCGCCGGTC GTGCATGCGC TGCGCGGCAA GCAGTTCGTC
GAATGGGACA ACCCGTTCGA CGTCGGGATG ACGGGGCTGA TCGGCTTCAG CTCGGGCTAT
CACGCGATGG AATCGTGCGA CACGCTGCTG ATGCTCGGCA CGGATTTTCC GTACCGGCCG
TTCTATCCGT CGAACGCGAA GGTTGCGCAG ATCGACTGGA AGGGCTCGCA GCTCGGCCAT
CGTGCGCCGC TCGCGCTCGG CCTCGTCGGC ACCGTGAAGG AAACGATCGC GGAATTGCTG
CCGCGGCTCA CGCGCAAGAC ACAGCGGCGC TTCCTCGAGA ACGCGTTGAA GCACTATGCG
GCCGCGCGCA AGGGGCTCGA CGATCTCGCG GTAGCCGAGC CGCCGGGCCG CGCGATCCAT
CCGCAATACC TGACGAAGAT CGTCGACGAA GTCGCGGCGG AAGACGCGAT CTTCACGGCC
GACGTCGGCA CGCCGACGCT GTGGGCCGCG CGCTACCTGA CGATGAACGG CAAGCGGCAG
CTGCACGGCT CGTTCAATCA TGGGTCGATG GCGAACGCGA TGCCGCAGGC GCTTGGCGCG
CAGGGGGCGC ATCCGGGGCG GCAGGTGGTG TCGCTGTCGG GCGACGGCGG GCTGTCGATG
CTGCTCGGCG ATCTGCTGAC CGCACGCCAG CTCAAGCTGC CGATCAAGAT CGTCGTGTAC
AACAACAGCC TGCTCGGCTT CGTGTCGATG GAGCTGAAGG CGGCCGGCTA TCTCGACACG
AACGTCGACC TGAGCCCGAC CGACTTCGCG GCGATCGCGA AGGGCGCGGG CATCTTCAGC
GTGCGCGTCG AGCATTCGGA GAACGTCGAG GAAGCGCTGC GCATGGCGTT CGCGCATGAC
GGGCCGGCGG TCGTCGACGT CGTCACGTCG AAGTACGAGC TCGCGATGCC GCCGAAGATC
GAGATCGCGC ATGCGAAGGG CTTCAGCCTG TTCATGCTGC GCGCGATCCT CAGCGGGCGC
GGCGACGAGA TCGTCGAGTT GGCGAGAACC AACCTGCGGT AA
|
|---|
| Protein sequence | MAKQTMAEYL AKTLAAAGVE RIWGVTGDSL NGLSFSLSQI GSIRWMHTRH EESAAFAAGA
DAASTGRLAV CAGSCGPGNL HLINGLYDCH RNHQPVLAIA AHIPSTEIGL GYFQETHPQE
LFRECSHFAE LVTNASQFPR VLARAMRTAI DERGVAVIVL PGDIALGDGP DELPAWSDAA
PPSILPADAD LDRLAALLNA SDAVTLLCGS GTQGAHDEVV ALADTLGAPV VHALRGKQFV
EWDNPFDVGM TGLIGFSSGY HAMESCDTLL MLGTDFPYRP FYPSNAKVAQ IDWKGSQLGH
RAPLALGLVG TVKETIAELL PRLTRKTQRR FLENALKHYA AARKGLDDLA VAEPPGRAIH
PQYLTKIVDE VAAEDAIFTA DVGTPTLWAA RYLTMNGKRQ LHGSFNHGSM ANAMPQALGA
QGAHPGRQVV SLSGDGGLSM LLGDLLTARQ LKLPIKIVVY NNSLLGFVSM ELKAAGYLDT
NVDLSPTDFA AIAKGAGIFS VRVEHSENVE EALRMAFAHD GPAVVDVVTS KYELAMPPKI
EIAHAKGFSL FMLRAILSGR GDEIVELART NLR
|
|---|
| |