| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2755 |
|---|
| Symbol | |
|---|
| ID | 3754522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 3122211 |
|---|
| End bp | 3122990 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637767603 |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_373510 |
|---|
| Protein GI | 78063602 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.910839 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTCA AGATTGACGG CCGACTGGCC GGCAAGGTCG CCGTCGTGAG CGGCGGCGCC
GGTGGCTGTG GCGGCGCGGC GTCCGAACTG TTCGCCGCAC AGGGCGCGAA GGTCGCGATC
ATCGACCGCG ACGGCGACGC CGCTGAAACA CTCGCATCCC GGCTGCGCGA CGCGGGCCTG
CAGGCGATCG GCTTCGGCGC CGACGTGTCG AAACAGGCCG AAGTCCAGCA GGCCGTGAAC
GCCGCGCGGG AGCAGTACGG CAACGCGGAC ATCCTGTTCA ATCACGCCGG CACGCTGATC
GTCAAACCGT TCCTCGACAT CGAGGAGTCG GAATGGGACT GGCTGATGGG CGTGAACGTG
AAGAGCATGT TCCTGATGAC GAAAGCGGTG CTGCCGCAGA TGCTGGAGAA GGGGCGGGGC
AGCATCGTCT GCACGTCGTC GATTTCCGCG GTATGCGCGA CGCCGGGCGA GGTGCTGTAT
GACGCGACCA AGGGCGCGTG CCACATGTTC GCGCGGGCGA TTGCGGTCGA GTACCGCGAC
CGCGGCATTC GGTGCAACGC GCTCGCACCG GGGTTCATCC GCACGCCGCA CGGGATGCGC
GAACTGAAGG ACCTGCAGGC GATGGGTGTC GACGCGACCG AGGCGGCGAT CGCGGTTCAG
CAAGGCCGCC TGTGCGAGCC GTCGGAAGTC GCGGCGGCGG CACTGTTCCT CGCTTCCGAC
GAGTCGAGTT TCGTCAACGG CACCCACCTG TTCGTCGACA ACTGCTTCTC CGCCGTCTGA
|
|---|
| Protein sequence | MNVKIDGRLA GKVAVVSGGA GGCGGAASEL FAAQGAKVAI IDRDGDAAET LASRLRDAGL
QAIGFGADVS KQAEVQQAVN AAREQYGNAD ILFNHAGTLI VKPFLDIEES EWDWLMGVNV
KSMFLMTKAV LPQMLEKGRG SIVCTSSISA VCATPGEVLY DATKGACHMF ARAIAVEYRD
RGIRCNALAP GFIRTPHGMR ELKDLQAMGV DATEAAIAVQ QGRLCEPSEV AAAALFLASD
ESSFVNGTHL FVDNCFSAV
|
|---|
| |