| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2573 |
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| Symbol | |
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| ID | 3754340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | - |
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| Start bp | 2922556 |
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| End bp | 2924559 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637767421 |
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| Product | RNase II stability modulator |
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| Protein accession | YP_373328 |
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| Protein GI | 78063420 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.477585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGACG AAAACGATAG CGCGGTGCTC GAGGCGCACG TCGGTACGCG CAGCCCCTGC
TGGCGTCTCG GCAGCGACAG CAATGCACTC GAACTGGCGG CCGTCCGCGG CCTGACCAAC
GTTGCCGTCG CGCTGACGGG CGAACAGGCC GCGCACATCC GCGCGCTGAC CGGTGTCACG
TCGCACCTCG TGCTCGACAT CACGCTGTTC GGCGAACCGG TTCGCCTCCA TCTCGTCGGC
CGGAAGGTCG ACACGACCAA CTGGGCCGGC ACGGCGTCCG CCTATTCCGA TGCCGAGTCC
GTCGCGGGCG ATCTCGCGAA CGGGCTTGCG TTCGCCGAGC AGGTCGTGTC CGAAGTGAAT
TCGCTCGTGG TGATTCTCGA CCGCAACGGG ATGGTGCAGC GCTTCAACCG CCTGTGCGAG
GAAGTGACGG GCAAGCGCGA GGTCGACGTG ATCGGCCGCA GCGCGTTCGA GCTGTTCATG
ACCCCCGAGC AGGGCGCGCA GTCGCGCAGC AACATCACGG GCTTTTTCGC GAGCAACCAC
TCGTTCGCGG TCGAGCGCTA CATCAACACG GTCAACGGGC CGCGCCTGTT CCAGTTCCGC
AACAAGTTCG TGCAGAGCGG CAGCGGCGTC GAAGAGCAGT TCCTGATCTG CTCGGGCATC
GACATTACCG AGGAGCGCAG CGCGCAGCAG CGGCTCAGCG AACTCGCGAA CACCGACGTG
CTGACCGGCC TGCCGAACCG CCATGCGATC AGCGAGCGCA TCCACGCGGC GATCGCGGCC
GAGACGGCCG CGACGCGCGG GCAGGTCGGC ATCCTGTTCC TCGATCTCGA CAACTTCAAG
CGCGTCAACG ATCACTACGG GCACATCACC GGCGACCGGC TGCTGCAGGA CGTGTCGGCG
ATCATCAGCG GTTGCCTGCC GTCCGGCGCG ACGCTCGCGC GGCTCGGTGG CGACGAATTC
CTCGTGCTGT TCGAGCACGG CACGCGGCCG CTGCTCGAAG CGACCGCGCA GATCATTCTC
GAACGGCTGC GCACGCCGAT TCATCTCGGG CTGATGGAGG TCTACACGAG CTGCTCGATC
GGCATCGCGA TGCATCCGCA GCACGGCGAT TCGCTCGAGA CGCTGATCCG CAGCGCCGAT
ACGGCCATGT ACGTCGCGAA GGAAGAGGGC AAGCATACGT ATCGCGTGTT CTCGCTGGAG
ATGAACCAGA AGGTCGCGAA GTACATGTGG CTCGACACGA ACCTGCGCAA AGCGCTCGAA
GAGGAGCAGT TCGTGCTGCA CTACCAGCCG GTCGTCGATA TCGCGACCGG CGACGTGCAC
GGGGTCGAGG CGCTGGTCCG CTGGCAGTCG CCCGATCGCG GGCTCGTCGC GCCGGTCGAG
TTCATCCGCT TCGCGGAGGA GTCGGGCCTG ATCGCGCCGC TCGGGCGCTG GGTGATGCGT
ACCGCGGCCG CGCAGGCCGC CGCATGGAAG GCGAAGGGGC TCGGCATCCG GATCGCGGTG
AACGTGTCCG CGCGGCAGTT GCAGGACATG AACATCGTGC ACCAGATGGC GTCGATCCTC
GACGCGGCGG GGCTCAAGCC CGGCCTGCTC GACATCGAGC TGACCGAGAG CTGCTTCATC
GAGGACGAAG ACGCGGCCAA CGGCTTGATG CGGCAGTTCC GCCAGCTTGG CGCGGAGATC
CATCTCGACG ATTTCGGCAC TGGCTATTCG TCGCTGTCGC AGTTGTCGCG CCTGCCGCTC
GACGCGATCA AGCTCGATCG CACGTTCATC ACGGCCATCG ACCGCAATCC GCGCTCGCAG
GCGCTGGTGC GCTCGGTTGT GTCGCTCGCG AAGGCGCTGA ATTTCGCGGT GGTCGCCGAG
GGCGTCGAAA CGCATGCGGA AGCCGAATTC CTCAAGCAGC TCGACGTCGA TCATGCGCAG
GGCTACTACT ACGCCCGCCC GATGCCGGCA CAGGCGTTTG AGGCGTGGCT CGCGGAGACG
AGAAAGCTCA GGCTGATCGC CTGA
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| Protein sequence | MDDENDSAVL EAHVGTRSPC WRLGSDSNAL ELAAVRGLTN VAVALTGEQA AHIRALTGVT
SHLVLDITLF GEPVRLHLVG RKVDTTNWAG TASAYSDAES VAGDLANGLA FAEQVVSEVN
SLVVILDRNG MVQRFNRLCE EVTGKREVDV IGRSAFELFM TPEQGAQSRS NITGFFASNH
SFAVERYINT VNGPRLFQFR NKFVQSGSGV EEQFLICSGI DITEERSAQQ RLSELANTDV
LTGLPNRHAI SERIHAAIAA ETAATRGQVG ILFLDLDNFK RVNDHYGHIT GDRLLQDVSA
IISGCLPSGA TLARLGGDEF LVLFEHGTRP LLEATAQIIL ERLRTPIHLG LMEVYTSCSI
GIAMHPQHGD SLETLIRSAD TAMYVAKEEG KHTYRVFSLE MNQKVAKYMW LDTNLRKALE
EEQFVLHYQP VVDIATGDVH GVEALVRWQS PDRGLVAPVE FIRFAEESGL IAPLGRWVMR
TAAAQAAAWK AKGLGIRIAV NVSARQLQDM NIVHQMASIL DAAGLKPGLL DIELTESCFI
EDEDAANGLM RQFRQLGAEI HLDDFGTGYS SLSQLSRLPL DAIKLDRTFI TAIDRNPRSQ
ALVRSVVSLA KALNFAVVAE GVETHAEAEF LKQLDVDHAQ GYYYARPMPA QAFEAWLAET
RKLRLIA
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