| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2521 |
|---|
| Symbol | |
|---|
| ID | 3754288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 2867867 |
|---|
| End bp | 2869651 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637767369 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_373276 |
|---|
| Protein GI | 78063368 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0533071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.360744 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCG CGTTCCGCTT CCCGCCCCCG GACGACGACA ACCCGGACGC GTCGCACCTG
TTCATGTCGT CGCTGCCGCC GGGCCGGCGC GAACGGCGGC TCGCGCTCGC GACCGTGCTC
ATCTCCGCCG TGATCTTCGC CGCGCTTGCA CCCTTCGCCG GCAGGCCGCT GGCGCCGGGC
GCGGCGTTCA TCCCCGTGTA CCAGTCGGCG ATCGTCGTCA ACGACATGGT GACGGCCGGC
CTGCTGCTCG GCCAGTACGC GATCCTGCGC CAGAGGCCGC TGCTCGTGCT CGCGGGCGGC
TACCTGTTCA CAGGTTTCAT GGCCGGCACC CACATGCTGA CCTTTCCCGG GCTGTTCACG
CCGACCGGCC TGCTCGGCGC CCGCGACCAG ACCACCGCCT GGCTGTACCT GTTCTGGCAC
GGCGGCTTTC CGCTCGCGGT CGCCGCGTAC GCGCTGCTGC GCGCGACGTC GCGTACACCG
GGCCCGATCC CGGCCCCGCA GCGCCGCGCG GCGATTCCGG TGATGCTGTG CATCGCGGCC
GCAGTCGGCG CGACGGTCGC GCTCGCGCTG CTCGCGACGG CCGGCCACGA CCTGCTGCCG
CGCATCATGA ACGGCAACCG GATGGCCGCG ACGATGACGA ACGCGATCAC GATCGTCTGG
GGGCTGAACC TGGTCGCGCT GATGCTGATG TGGCAGCGGC GGCGACGCCA TTCCGTGCTC
GACCTGTGGG TGATGACGGT GCTCGTCGCG TGGCTGTTCG ACATCGCGCT GTCGTCGATG
CTCAATCACG GGCGCTACGA TCTCGGCTTC TACGCGGGGC GCGCGTACGG CCTCGTCGCC
TCCGGCGTCG TGCTGTTCGC GATGCTGTTC GAGAACGGCC GGCTGCATGC GCAGACGGTG
CGCGCGCTGG CCGGCGCGCG CTACCAGCAT CTGCTCGTCG TGCAGAAGAG CGCGCAGCTG
AACGACGCGA ACGAACGGCT CGAACAGCGC GTCGCCGCGC GCACCGCGCA ACTGAGCGCG
TCGAACCGCG ACCTGCGACG CGAAGTCGAG GACCGCGTGC GCGCCGAGCG GGCGCTACAG
GCGTCGCGCG AGGAGCTGCG CGAGATCGCC GCGATCAGCG CGAGCGCACG CGAGGCCGAG
CAGCGCCGCA TCGCACGCGA GCTGCACGAC GAACTCGCGC AGACCCTCGC GACGCTGAAG
AACGATCTCG AATGGCTGAT CGACCGCGTG CCGCAGGACG ATGCGCAACT GGCGCGCAAG
ATCGCGGCGA TGCACGCGCT TGCGCGCGGT GCGGTAGCCG CGACACGCCG CATCGCATCG
GACCTGCGCC CGCTGATGCT CGACGATCTC GGCTTCGCCG CGGCCATGCA ATGGCTCGTG
GAGGATTTCC GGCACCGTCA CGGCATCGCA TGCGCGCTGC ATGTCGACCC GCCGGAGCTG
CAACTCGACG AGCCTTACGC GACGGCGGTG TTCCGCATCG CGCAGGAAGC GCTCGCGAAC
GTCGCGCGGC ACGCGGCCGC GTCGCATGCG ACCGTCGAAC TCGTGCATGC GAACCATGCG
ATCGAACTGA CGATTCGTGA TGACGGCGCG GGATTCGATC CAGGCGTGCC ACGCAAGTCG
GGATCGTTCG GGCTGGTGGG GTTACGCGAG CGTGCGTATC TCGTCGGCGG TACGCTGCGG
ATCGCGACGA CACTCGGCGA AGGAACGACG GTCGAGGTGG AGATTCCGCT GTCGCCTGCG
CAGGTGACGG TCGCGCATGG CGGGGTTGGG GGCGCGCGCG GGTAG
|
|---|
| Protein sequence | MTAAFRFPPP DDDNPDASHL FMSSLPPGRR ERRLALATVL ISAVIFAALA PFAGRPLAPG
AAFIPVYQSA IVVNDMVTAG LLLGQYAILR QRPLLVLAGG YLFTGFMAGT HMLTFPGLFT
PTGLLGARDQ TTAWLYLFWH GGFPLAVAAY ALLRATSRTP GPIPAPQRRA AIPVMLCIAA
AVGATVALAL LATAGHDLLP RIMNGNRMAA TMTNAITIVW GLNLVALMLM WQRRRRHSVL
DLWVMTVLVA WLFDIALSSM LNHGRYDLGF YAGRAYGLVA SGVVLFAMLF ENGRLHAQTV
RALAGARYQH LLVVQKSAQL NDANERLEQR VAARTAQLSA SNRDLRREVE DRVRAERALQ
ASREELREIA AISASAREAE QRRIARELHD ELAQTLATLK NDLEWLIDRV PQDDAQLARK
IAAMHALARG AVAATRRIAS DLRPLMLDDL GFAAAMQWLV EDFRHRHGIA CALHVDPPEL
QLDEPYATAV FRIAQEALAN VARHAAASHA TVELVHANHA IELTIRDDGA GFDPGVPRKS
GSFGLVGLRE RAYLVGGTLR IATTLGEGTT VEVEIPLSPA QVTVAHGGVG GARG
|
|---|
| |