| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2513 |
|---|
| Symbol | |
|---|
| ID | 3754280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 2858380 |
|---|
| End bp | 2860095 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637767361 |
|---|
| Product | glucose-methanol-choline oxidoreductase |
|---|
| Protein accession | YP_373268 |
|---|
| Protein GI | 78063360 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0138495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.356512 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA CTTTCGACTA CATCGTCGTC GGCGGCGGTT CGGGCGGCAG CGTCGTCGCC
GGGCGGCTGA CCGAGGATCC GGCCGTGACC GTCTGCGTGC TCGAGGCCGG TGGCCGCGGC
GACGGCACGC TCGTCAACGT GCCGACCGGT GCGGTCGCGA TGATGCCGAC CCGCATCAAC
AATTGGGCCT TCGACACGGT GCCGCAGCCG GGCCTCGGCG GGCGCATCGG CTACCAGCCG
CGCGGCAAGG TGCTGGGCGG TTCGTCGGCC ATCAACGCGA TGGTCTATAT CCGCGGCCAC
CGCGTCGACT ACGACGGCTG GGCCGCGCTC GGCAACGAAG GCTGGAGCTA CGACGACGTG
CTGCCGTACT TCCGCCTGAG CGAGCACAAC GAGCGCTTCG ACGATGCGTG GCACGGCCGC
GACGGCCCGC TGTGGGTGAG CGACCTGCGC ACCGGCAACC CGTTCCATGC GCGCTACCTG
GAAGCCGCGC AGCAGGCCGG CCTGCCGCTC ACCGACGATT TCAACGGCGC GCAGCAGGAA
GGCATCGGCA TCTACCAGGT CACGCAGAAG CACGGCGAGC GGTGGAGCGC GGCGCGCGCG
TACCTGCTGC CGCACGTCGG CCGCCGCGAC AACCTGACGG TCGAGACGCA CGCGCAGGTG
CTGCGCATCC TGTTCGACGG CACGCGCGCG ATCGGCGTCG AGGTGCGGCA GCATGGCGAG
GTCCGCACGC TGCGCGCACG GCGTGAAGTC GTGCTCGCGG CTGGCGCACT GCAAACACCG
CAGTTGCTGA TGCTGTCGGG CGTCGGCCCG GGCCGCGCGC TCCAGCAACA GGGCATCGCC
GTGCACGCCG ACCTGCCCGG TGTCGGCCTC AACCTGCAGG ATCATCCTGA TTTCATCTTC
GGCTACCGCA CGCGCAGCGT CGACACGATG GGCGTGTCCG CGGGCGGCGG CCTGCGCATG
CTGCGCGAGC TGGCGCGCTT TCGCCGCGAA CGGCGCGGCA TGCTGACGTC GAATTTCGCG
GAAGGCGGCG GCTTCCTGAA GACGCGCGCC GAGCTCGACG CGCCGGACAT CCAGCTGCAC
TTCGTCGTCG CGCTCGTCGA CGATCACGCG CGCAAGCTGC ACGCCGGTCA CGGGCTGTCG
TGCCACGTGT GCCTGCTGCG GCCGCGCAGC CGCGGCTCGG TCACGCTCAA CAGCGCCGAT
CCGCTCGCCG CGCCGCGCAT CGATCCCGCG TTCTTCGACG ATCCGCGTGA CCTCGACGAC
ATGGTCGCGG GCTTCCGGAT CACACGCCGG CTGATGGAAG CGCCGGCGCT CGCCGGCTGG
ACCACGCGCG ACCTGTTCAC CGCGAACGTC AACACCGACG ATGAAATCCG CGACGTGCTG
CGGCGGCGCA CCGACACCGT GTATCACCCG GTCGGCACGT GCCGGATGGG GCACGACGCA
CTCGCTGTCG TCGATCCGCA ACTGCGCGTG CGCGGCCTGC AGGGGCTGCG CATCGTCGAT
GCGTCGATCA TGCCGACGCT TATCGGCGGC AACACCAACG CGCCGACGAT CATGATCGCC
GAGAAGGCCG TCGACATGAT CCGGGGCGTG TGTCGCACGA CCGCGCAGCC GCAGGACGAC
GGCACCGACA CTTCGACGAA TCGCGACATC GTTCCTGCCA CGTGCGCCGC GCGCGATGCC
ATCCAGCCCG AGGAAACCCG CCATGTTGTC GCCTGA
|
|---|
| Protein sequence | MSKTFDYIVV GGGSGGSVVA GRLTEDPAVT VCVLEAGGRG DGTLVNVPTG AVAMMPTRIN
NWAFDTVPQP GLGGRIGYQP RGKVLGGSSA INAMVYIRGH RVDYDGWAAL GNEGWSYDDV
LPYFRLSEHN ERFDDAWHGR DGPLWVSDLR TGNPFHARYL EAAQQAGLPL TDDFNGAQQE
GIGIYQVTQK HGERWSAARA YLLPHVGRRD NLTVETHAQV LRILFDGTRA IGVEVRQHGE
VRTLRARREV VLAAGALQTP QLLMLSGVGP GRALQQQGIA VHADLPGVGL NLQDHPDFIF
GYRTRSVDTM GVSAGGGLRM LRELARFRRE RRGMLTSNFA EGGGFLKTRA ELDAPDIQLH
FVVALVDDHA RKLHAGHGLS CHVCLLRPRS RGSVTLNSAD PLAAPRIDPA FFDDPRDLDD
MVAGFRITRR LMEAPALAGW TTRDLFTANV NTDDEIRDVL RRRTDTVYHP VGTCRMGHDA
LAVVDPQLRV RGLQGLRIVD ASIMPTLIGG NTNAPTIMIA EKAVDMIRGV CRTTAQPQDD
GTDTSTNRDI VPATCAARDA IQPEETRHVV A
|
|---|
| |