| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2415 |
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| Symbol | |
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| ID | 3754181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | - |
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| Start bp | 2749257 |
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| End bp | 2750960 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637767262 |
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| Product | Sigma54-dependent transcriptional regulator RtcR |
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| Protein accession | YP_373170 |
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| Protein GI | 78063262 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4650] Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.855599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGGTT GGGTGCCGAT GCTTCCTGCA TCTCGTTGCC GAGAAAATCC GATACAATCG
GATCGCTTCT TATCCCATGA GATAAACATG CGAAAGACTG TTGCCATCGG CTTTCTCGGC
ACCGTGCTCG ATCAGGGCGG CGGCTCGCAG CGCCGCTGGC GTAACTGGCG GCCGACGATT
TCGCTGTGCG AGCAGCGCGA CACGCCGATC GACCGGCTCG AACTGCTGCA CTCGCCGAAC
TACGCACGTC TCGCGAACCG CGTGAAGCGG GACCTGGAGC GCGTGTCGCC GCACACCGAC
GTGCGGCTCA TCCCGATGGA GATTCGCGAT CCGTGGGATT TCGAGGAGGT CTACGCGACG
CTGCACGATT TCGCGCGCGC CTACCCGTTC GATCTCGACC GCGAGGACTA CCTGATCCAC
ATCACGACAG GCACGCACGT CGCGCAGATC TGCTGGTTCC TGCTCGCGGA GGCGCGCTAC
CTGCCTGCGC GTCTCGCGCA GACGGCGCCA CCGCAGAAGA CCGATGAAGG ACTGAGCGGT
CCCGGCACGA TGTCGGTGAT CGATCTCGAC CTGTCGCGCT ACAACCGCAT CGCGCAGCGC
TTCACGCGCG AGCGCGACGA AACCGTGTCG TTCCTGAAGG CTGGCATCGC AACGCGCAAC
GCGCGCTTCA ACGCGCTGAT CGAGCAACTG GAGCGCGTGG CCGTGCGTTC GCGCGCGCCG
ATGCTGCTGG TCGGGCCGAC GGGCGCCGGC AAGTCGTTTC TCGCGAAGCG CGTGTACGAG
CTGAAGCGCG GCCGCCATCG GCTCGCGGGG CCGTTCATCG AGATCAACTG CGCGACGCTG
CGCGGCGACG CGGCGATGTC GACGCTGTTC GGTCACGTGA AGGGTGCGTT CACGGGCGCG
CAGTCGGCGC GTGCCGGGTT GCTGCGCGCG GCGGACAGTG GCCTGCTGTT TCTCGACGAG
ATCGGCGAAC TCGGGCTCGA CGAACAGGCG ATGCTGCTGA AGGCGATCGA GGAGAAGCGT
TTCCTGCCGG TCGGTGCGGA TGTCGAGGCG ACCAGCGACT TCGAACTGAT CGCGGGCACG
CACCGCGACC TGCGGCAGAT GGTGGCGGCC GGCACGTTCC GCGAGGATCT CTACGCGCGG
ATCAACCTGT GGACGTACGA ACTGCCGGGG CTCGCCGAGC GCCGCGAGGA CATCGAGCCG
AACCTCGAAT TCGAACTCGA CCGTTTCGGC CGCGAGCAGG GCGAGCAGGT GCGGTTCAAC
GTCGAGGCGA AGCGGCGCTA TCTCGCGTTC GCCGCATCGC CGCGCGCGGC ATGGGCCGGC
AACTTCCGGG AGCTGTCCGC GTCGGTCACG CGGATGGCGA CATTGGCCGA TGCCGGGCGG
ATCACCGAGG CGCTTGCTGA ACAGGAAGTC GAGCGGCTGA CGCGCACGTG GTCGTCGCCG
GGCGGCGCGG GTGCGTCCGA TGGGTATGTC GACGCGGTGT TCGGCGCGCG TGCGGCGGAA
CTCGACCTGT TCGACCGTGC GCAGCTCGAG CGCGTGCTCG ACGTATGCCG CGTGTCGGCA
AGCCTGTCCG AAGCCGGGCG CACGCTGTTC GCGGTATCAC GACAGAGCAA GAAGCAGCCG
AACGATGCGG ACCGGCTGCG CAAGTATCTT GCGCGGTTCG GGCTGGATTG GGAGGGCGTG
CGGCAGGTGC TCGACGGGGT GTGA
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| Protein sequence | MGGWVPMLPA SRCRENPIQS DRFLSHEINM RKTVAIGFLG TVLDQGGGSQ RRWRNWRPTI
SLCEQRDTPI DRLELLHSPN YARLANRVKR DLERVSPHTD VRLIPMEIRD PWDFEEVYAT
LHDFARAYPF DLDREDYLIH ITTGTHVAQI CWFLLAEARY LPARLAQTAP PQKTDEGLSG
PGTMSVIDLD LSRYNRIAQR FTRERDETVS FLKAGIATRN ARFNALIEQL ERVAVRSRAP
MLLVGPTGAG KSFLAKRVYE LKRGRHRLAG PFIEINCATL RGDAAMSTLF GHVKGAFTGA
QSARAGLLRA ADSGLLFLDE IGELGLDEQA MLLKAIEEKR FLPVGADVEA TSDFELIAGT
HRDLRQMVAA GTFREDLYAR INLWTYELPG LAERREDIEP NLEFELDRFG REQGEQVRFN
VEAKRRYLAF AASPRAAWAG NFRELSASVT RMATLADAGR ITEALAEQEV ERLTRTWSSP
GGAGASDGYV DAVFGARAAE LDLFDRAQLE RVLDVCRVSA SLSEAGRTLF AVSRQSKKQP
NDADRLRKYL ARFGLDWEGV RQVLDGV
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