| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2344 |
|---|
| Symbol | |
|---|
| ID | 3754110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 2673737 |
|---|
| End bp | 2674831 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637767191 |
|---|
| Product | HlyD family secretion protein |
|---|
| Protein accession | YP_373099 |
|---|
| Protein GI | 78063191 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACGA CCCAAGCCGC TGCCACATCC CGTGAAGCAG CCACACTCGA CCAGCCCGCG
AAGCAACAGC GCCGCGTGCC GTGGATGCGC ATCGCGGTGG GTGCCGTCGT CATCGTCGTC
GTCGCCGCCG CGCTCGACTG GCTGTTCGTG CTGCGCTTCC AGGAGAGCAC CGACGATGCG
TATGTCGGCG GCGACGTGAC GGTGCTCGCG CCGAAGGTCA ACGGCTTCGT CGACAAGATC
CTCGTGACCG ACAACCAGCG CGTGAAGGCC GGCGACGTGC TCGTGCAGCT CGATGCGCGC
GACTACGACG CAAAGCTCGC GCAGGCCAGT GCCGAAGTCG ACAGCGCCCG CTCCGCCGTG
ACCGAACTCG CGGCGAAGCA GCAACTGCAA TACGCGGTGA TCGGCCAGCA GGCAGCCGAC
AAGAACGCGT CGTCGGCCGA GCTGACACGC GCCGCATCGG ATCGCGTGCG CTATCGCGAG
CTCGTCAAAT CCGACGCCGT GTCGAACCAG ATCGTCGAAC GCGCGGACGC CGACTACTCG
AAGGCCGGCG CCGCCGTCGA GCGCAGCGAC GCCGCGCTGC TCGCATCGAA GCGTCAGCTC
GACGTGCTCG GCGCGCAACT CGCCGATGCG CAGGCGCGAG TGAACACCGC GCTTGCCGCG
CAGCGTGTCG CCGCGCTCAA CGTCGAATAC ACGACGATCC GCTCGCCGGT CGATGGCTAC
GTCGGCAACC GCACGGGCCG CGTGGGGATG CTCGCGAACG TCGGTGTGCC GCTGCTGACG
GTCGTGCCGG CTGCCGGACT GTGGGTCGAC GCGAACTTCA AGGAAGACCA GCTTCGCAAG
ATGCACGCGG GCGATCGCGT CGACGTGTCG CTCGATGCGT CGAGCACGAA ACTGCACGGC
CGCGTCGACA GCCTCGCGCC CGCCACCGGC GCAACCTTCA GCGTGCTGCC GCCCGAGAAC
GCGACCGGTA ACTTCACGAA GATCGTCCAG CGCGTACCGG TGCGCGTGCA TCTCGATCCG
CAGCCGGGAC TCGACCACGT GCTGCGCCCC GGCCTGTCCG CGGTCGTGAC CGTGCATACC
GATCACGCGA ACTGA
|
|---|
| Protein sequence | MDTTQAAATS REAATLDQPA KQQRRVPWMR IAVGAVVIVV VAAALDWLFV LRFQESTDDA
YVGGDVTVLA PKVNGFVDKI LVTDNQRVKA GDVLVQLDAR DYDAKLAQAS AEVDSARSAV
TELAAKQQLQ YAVIGQQAAD KNASSAELTR AASDRVRYRE LVKSDAVSNQ IVERADADYS
KAGAAVERSD AALLASKRQL DVLGAQLADA QARVNTALAA QRVAALNVEY TTIRSPVDGY
VGNRTGRVGM LANVGVPLLT VVPAAGLWVD ANFKEDQLRK MHAGDRVDVS LDASSTKLHG
RVDSLAPATG ATFSVLPPEN ATGNFTKIVQ RVPVRVHLDP QPGLDHVLRP GLSAVVTVHT
DHAN
|
|---|
| |