| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2258 |
|---|
| Symbol | |
|---|
| ID | 3754024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 2578915 |
|---|
| End bp | 2580396 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637767105 |
|---|
| Product | sigma-54 dependent trancsriptional regulator |
|---|
| Protein accession | YP_373013 |
|---|
| Protein GI | 78063105 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.196111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00780005 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGCTA GGTCACCTGA CGCAAACGGG CAAGCGGTGT CCGAGATGAC GCATGTGTCC
GTCACCGCGC CCGAAGACGG ACGCAAGCTG TTCGTGATCA TGCGTTCGCC CGATGAGCCG
TTGCTTGCGC AACTGCGCGG GCTCGGCTGG GAAATCTCCG TCGCGAAGAC GGCCGGCGCC
GCGCAGAACA TGACATCCGG CGTGAGCGTT GCCGCCGGCC TGGTCGATTT CACCGGGTTC
ACGTCGCGCG ACTATCCCGC GCTGAAGGCG TGCCTGAGCC AGCCGTCGAT CGGCTGGATT
TCCATCGCGC AGGCCGGCAT CACGATCACG CCCGCGGTGC GCGAGCTGAT CCGCAGCTAT
TGCTTCGATT ACGTGACCCT TCCGTTGCCC TACGAATGGA TTTCGCACGT GCTCGGGCAT
GCGCGCGGGA TGGCCGCGCT CGATCGCGTC GACGGCGCGG CCTATGCGGC GTCGATCGGC
GAACACGGGA TGATCGGCAA CTGCGAGGCG ATGCAGCAGC TGTTCAGCAC GATCCGCAAG
GTCGCGAAGA CCGACGCGAG CGTGTTCATC TCGGGCGAGT CGGGCACCGG CAAGGAGCTG
ACGGCGCTGG CGATTCACGA GCGCTCCGGC CGCGGCAAGG GGCCGTTCGT CGCGATCAAT
TGCGGCGCGA TTCCGCATCA CCTGCTGCAG TCGGAATTGT TCGGCTACGA GCGCGGTGCG
TTCACCGGCG CGAACCAGCG GCGCGCGGGC CGGATCGAAT CGGCGAACGG CGGCACGCTG
TTTCTCGACG AAATCGGCGA CATGCCGGTC GAAAGCCAGG CGAGCCTGCT GCGATTCCTG
CAGGAAGGGA AGATCGAGCG GCTCGGCGGG CAGGAATCGA TTCCGGTCGA TGTGCGGATC
ATCTCGGCTA CCCACGTGGA TCTCGACGGC GCGGTCGAGG GCGGGCGCTT CCGCGCGGAC
CTTTATCACC GCCTGTGCGT GCTGCGCATC CACGAGCCGC CGCTGCGCGC GCGCGGCAAG
GACATCGACA TCCTCGCGCA CTACGTGCTG CAGAAATTCA AGTCCGACAG CGGCCGCAAG
ATCAGCGGCT TCACGTCGGC CGCGCTCGAT GCGATGCGCC GCTACGAGTG GCCCGGCAAC
GTGCGCGAGT TGATCAACCG CGTGCGGCGC GCGATCGTGA TGGCCGAGAG CCGGCTGCTG
ACGCCGCACG ATCTTGGGCT CGACACACCG GGCGAAACCG AGCCGGTGAC GCTCGAACAG
GCACGGGCGC TCGCCGAGCG CACCGCGATC GAGAATGCGC TGCTGCGCAA CGATCACCGC
ATCAACAAGG CCGCGGCCGA ACTCGGCATT TCACGCGTGA CGCTCTACCG GATGATGATC
GAGCACGGGC TGAACGATCA CGACAACAAC GGCGGGAACG GCGACAACGG CGGTCACGAC
GGCACGCCGT CCGGCGACGC GGGGCATCAG CGGGTCGGCT GA
|
|---|
| Protein sequence | MVARSPDANG QAVSEMTHVS VTAPEDGRKL FVIMRSPDEP LLAQLRGLGW EISVAKTAGA
AQNMTSGVSV AAGLVDFTGF TSRDYPALKA CLSQPSIGWI SIAQAGITIT PAVRELIRSY
CFDYVTLPLP YEWISHVLGH ARGMAALDRV DGAAYAASIG EHGMIGNCEA MQQLFSTIRK
VAKTDASVFI SGESGTGKEL TALAIHERSG RGKGPFVAIN CGAIPHHLLQ SELFGYERGA
FTGANQRRAG RIESANGGTL FLDEIGDMPV ESQASLLRFL QEGKIERLGG QESIPVDVRI
ISATHVDLDG AVEGGRFRAD LYHRLCVLRI HEPPLRARGK DIDILAHYVL QKFKSDSGRK
ISGFTSAALD AMRRYEWPGN VRELINRVRR AIVMAESRLL TPHDLGLDTP GETEPVTLEQ
ARALAERTAI ENALLRNDHR INKAAAELGI SRVTLYRMMI EHGLNDHDNN GGNGDNGGHD
GTPSGDAGHQ RVG
|
|---|
| |