| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2199 |
|---|
| Symbol | |
|---|
| ID | 3753964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 2516227 |
|---|
| End bp | 2518059 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637767045 |
|---|
| Product | pseudomonalisin |
|---|
| Protein accession | YP_372954 |
|---|
| Protein GI | 78063046 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4934] Predicted protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGG TTGCAGACAA GAATCAAAAG CACAATCGCT TCGTCAAGCT CGCATTCGCC
GCCGCAGCCG CCGCATCGTT CGGCATGGCG ACCGCCTACG CCGCGCCTGC GGCCGGCTGG
ACGGAAACGC ACACCAAGGG TTTCCTGCCG CTCGTGCAGC AGAACGAAGC CGGTACCGCC
GGCGCGCCGG CCGCGAGCAC CGCGGCCGCT GCAGCAGCAG CCATCGAGAT GGCGCCGGGC
GAGTCGGTGG ACATCGTGCT CGGCCTGAAC CTGCGCAACG AGGCGCAACT CGACCAGTAT
CTGCACGACC TGCACACGCC TGGTTCACCG CACTACCGGC AGTTCCTCAC GCCGGCGCAG
TTCGCGGCGC AATATGCGCC GACCGACCAG CAGGTCGCCT CGGTCGTCGC GCATCTGCGC
AAGGAAGGCT TCGTGAACAT CGTGGTCGCG CCGAACCGCC TGCTGGTCTC CGCGTCCGGC
ACCGCGGCTA CCATCAAGTC CGCGTTCCGC ACGACGCTCA AGCGCTTCAC GCGCAACGGC
CGCAGCGTCT ACGCAAATAC CGACGCCGCG CAAGTGCCGA ACGCGATCGG CGGCGTCGTG
GGTTCGGTGC TGGGCCTGCA GAACGTCGAG CTGATGCACA CGGGCGCGGG CAGCCAGCCG
CAAGGCAACA CCAGCAACCT GACGATTCCG GCCGGCGCAT CGGCGGTGCC GCACAACCCG
ACCGAATTCT CGTCGATCTA CGGCGGCGAC GGCACGCCGA CCGCCTCACA GACCACCGTC
GGCATCATCT CCGAAGGCGA CCTGTCGCAG ACGGTGAGCG ACCTCAATAC GTTCGCCGCA
AACAACAGCC TCGGCGCGAT CAGCAGCAGC ATCGTGAAGA CGGGCCCGTC CGGCAGCTCG
TACACCGACA CCGACGGCAC CGTCGAATGG AACCTCGACA GCCAGTCGAT CGTCGGCGCG
GCCGGCGGCA GCGTGAAGCA GGTCGTGTTC TACGTCGCGC CGTCGATGAC GCTCACGGCG
ATTACCGCCG CGTACAATAA GGCCGTGACC GACAACGTCG CGAAGGTGAT CAACGTGTCG
CTCGGCGTGT GCGAATCGTC CGCGAACAGC ACCGGCTCGC AGGCAACCGA CGACACGATC
TTCAAGCAGG CCGTCGCGCA GGGCCAGACC TTCTCGGTAT CCGCCGGCGA CCACGGCGCG
TACGAATGTG CGAGCGGCAC GCCGTCGCGC TCGACCTACA CGGTGAGCGA ACCGGCAACG
TCGCCGTACG TGATCGCGGT GGGCGGCACG ACGCTGTTCA CCAATACGTC GACCAACGCG
TACAACAGCG AGATCGTCTG GAACGATCCG AGCTGGCAGC CGGGCACCGT GTGGTCGACG
GGCGGCGGGT ACAGCAAGTA CGAAGCCGCG CCGTCGTGGC AATCGTCGAG CCTCACGGGA
TCGACCAAGC GCGCATTGCC TGACGTCGGC TTCGACGCCG ACCTGCGCAC CGGCGCGATT
CTCGTCGTGA ACGGCCAGAC GTCCGACACG CTGTGGGGCT CGGGTTACCT CAACAACGAA
GGCGGCACGA GCCTCGCCGC GCCGATCTTC ACGGGGATCT GGGCACGCCT GCAGTCCGCG
AACAACAATG CGCTCGGGTT CCCCGCGTCG AGCATCTACA AGTACTTCCC GAGCAACGCG
GCGCTGCTGC ACGACGTCAC GTCCGGCAAC AACGGCAGCG GCACCTACGG CTACAAGGCG
AAGGCCGGCT GGGACGCGAC GACGGGCTTC GGCAGCGTGA ACATCTCGAA GCTGAACACG
TTCATCCAGA GCACATCGGA TTTCGCACGC TGA
|
|---|
| Protein sequence | MNQVADKNQK HNRFVKLAFA AAAAASFGMA TAYAAPAAGW TETHTKGFLP LVQQNEAGTA
GAPAASTAAA AAAAIEMAPG ESVDIVLGLN LRNEAQLDQY LHDLHTPGSP HYRQFLTPAQ
FAAQYAPTDQ QVASVVAHLR KEGFVNIVVA PNRLLVSASG TAATIKSAFR TTLKRFTRNG
RSVYANTDAA QVPNAIGGVV GSVLGLQNVE LMHTGAGSQP QGNTSNLTIP AGASAVPHNP
TEFSSIYGGD GTPTASQTTV GIISEGDLSQ TVSDLNTFAA NNSLGAISSS IVKTGPSGSS
YTDTDGTVEW NLDSQSIVGA AGGSVKQVVF YVAPSMTLTA ITAAYNKAVT DNVAKVINVS
LGVCESSANS TGSQATDDTI FKQAVAQGQT FSVSAGDHGA YECASGTPSR STYTVSEPAT
SPYVIAVGGT TLFTNTSTNA YNSEIVWNDP SWQPGTVWST GGGYSKYEAA PSWQSSSLTG
STKRALPDVG FDADLRTGAI LVVNGQTSDT LWGSGYLNNE GGTSLAAPIF TGIWARLQSA
NNNALGFPAS SIYKYFPSNA ALLHDVTSGN NGSGTYGYKA KAGWDATTGF GSVNISKLNT
FIQSTSDFAR
|
|---|
| |