| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2084 |
|---|
| Symbol | |
|---|
| ID | 3753849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 2386723 |
|---|
| End bp | 2387439 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637766930 |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_372839 |
|---|
| Protein GI | 78062931 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0860576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.320515 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCAA CTGAATCGAA CCGGAACGTA CCTGCGATCC TGCTCATCGC GGCCTCGCGC
GGCCTTGGCC TGGCGATGGC GGAGGCGTTC CTGGACAAAG GCTGGCGCGT AACGGGCACC
GTGCGCGCAG GATCGGGGCG CACGAAGCTG CACGACCTCG CCGACCGGTT CGACGGCCGC
CTCGACATCG AGACGCTCGA CATCTGCGAG CCCGTGCAAC TGGCCGCGTT GAGCGAGCGG
CTGTCGGGTC GTCGCTTCGA CGTGCTGTTC GTGAATGCGG GCACGACGAA CGAGCCGACC
GAAACGATCG GCGAAGTGAC GACCGACGAG TTCGTGCGCG TGATGATCAC GAATGCGCTG
GCGCCGATGC GCGTGATCGA GACGCTGCAG GATCTCGTGA CTGCGGACGG CCTGATTGGC
GCGATGTCGT CGGGGCAAGG CAGCGTCGCG AACAACGTCA GCGGGATGCG CGAGGTCTAT
CGCGGCAGCA AGGCCGCGCT GAACCAGTTC ATGCGCAGCT TCGCGGCGCG TCAGGCCGAT
ACGCGGCGTG CGATGGTGCT GATGGCGCCC GGCTGGGTCC GCACGGAACT GGGCGGGCCC
GATGCGCGCC TGACGATCGA GGAAAGCGTG CCGAGTCTCG TCGACGTGGT GATCGCAAAG
CGCGTGCGCC CGGGGCTCGA GTATCTCGAC TATCTGGGGC GGACGGTGCC GTGGTGA
|
|---|
| Protein sequence | MQSTESNRNV PAILLIAASR GLGLAMAEAF LDKGWRVTGT VRAGSGRTKL HDLADRFDGR
LDIETLDICE PVQLAALSER LSGRRFDVLF VNAGTTNEPT ETIGEVTTDE FVRVMITNAL
APMRVIETLQ DLVTADGLIG AMSSGQGSVA NNVSGMREVY RGSKAALNQF MRSFAARQAD
TRRAMVLMAP GWVRTELGGP DARLTIEESV PSLVDVVIAK RVRPGLEYLD YLGRTVPW
|
|---|
| |