| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1895 |
|---|
| Symbol | |
|---|
| ID | 3753660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 2168179 |
|---|
| End bp | 2169099 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637766744 |
|---|
| Product | dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_372653 |
|---|
| Protein GI | 78062745 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.305178 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGAA ACGCCATTCA GTGGACCGGG GTTTTCCCGG CCGTCAGCAC CCAGTTCAAG
CCGGACTTTT CCCTCGACAT CGACGCCACG CACCGCGTGG TAAAGAACCT GGTGAACGAC
GGCGTGTCGG GCCTCGTGGT CTGCGGCACG GTCGGCGAAA ACACGTCGCT GTCGACGAGC
GAGAAGCTCC AGGTGATCGA GGCTGCACGC GACGCAGCCG GCGGCAAGAT TCCGGTGATC
GCCGGCATCG CCGAATTCAC GACCGAATTC GCACGCAACA CGGTGCGTGA AGCGCAGCGC
GTCGGCGTCG ACGGCGTGAT GGTGATGCCC GCGCTGGTCT ACTCGGCGAA GCCGCACGAA
ACCGCCGCCC ACTTCCGCGC GGTCGCAACC AGCACCGACC TGCCGGTGAT GGTCTACAAC
AACCCGCCGA TCTACAAGAA CGACGTGACG CCCGACGTGC TGATCGCGCT GCAGGATTGC
GAAAACATCG TCTGCTTCAA GGATTCGTCG GGCGATACGC GCCGCTTCAT CGACCTGCGC
AACGCGGTCG GCGATCGCTT CGTGCTGTTC GCGGGCCTCG ACGACGTCGT GGTCGAGAGC
ATTGCCGTCG GCGCCGAAGG CTGGGTGTCG GGCATGTCGA ACGCGTTCCC GAAGGAAGGC
GAGACGCTGT TCCGCCTCGC GAAGCAGAAG CGTTTCGACG AAGCGCTCGC GCTGTATCGC
TGGTTCATGC CGCTGCTGCA CCTCGATGCA CGCCCCGATC TCGTGCAGTG CATCAAGCTG
TGCGAAGAGC TGGTCGGCCG CGGCAGCGCG ATCACGCGTC CGCCGCGCCT CGCACTGCAG
GGCGACACGC TCGCGGAAGT GAAGGCCATC GTCGCGAAGG CGCTCGAAAC GCGCCCGGCG
CTGCCCGACG TCGGTCTCTG A
|
|---|
| Protein sequence | MSRNAIQWTG VFPAVSTQFK PDFSLDIDAT HRVVKNLVND GVSGLVVCGT VGENTSLSTS
EKLQVIEAAR DAAGGKIPVI AGIAEFTTEF ARNTVREAQR VGVDGVMVMP ALVYSAKPHE
TAAHFRAVAT STDLPVMVYN NPPIYKNDVT PDVLIALQDC ENIVCFKDSS GDTRRFIDLR
NAVGDRFVLF AGLDDVVVES IAVGAEGWVS GMSNAFPKEG ETLFRLAKQK RFDEALALYR
WFMPLLHLDA RPDLVQCIKL CEELVGRGSA ITRPPRLALQ GDTLAEVKAI VAKALETRPA
LPDVGL
|
|---|
| |