| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1880 |
|---|
| Symbol | |
|---|
| ID | 3753645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 2154268 |
|---|
| End bp | 2155752 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637766729 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_372638 |
|---|
| Protein GI | 78062730 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.208633 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCTT TCACCGACTC ATCCCGCCCG CCCTTGCCGA TGGACGGCGA ACCGCTTTAC
GAACGGCTCG CCGAGCATTA CCGCCGCATC ATCGCGGCCG GTACGCTGTC GCCCGGCGAC
CGGATGCCGT CGGTGCGCGC GTTCATGGCA CAGCACGGCG TGAGCCTGTC GACCGCGATC
CAGGCGTTCC GGCGGCTCGA GGATACGGGC TGGTGCGAGG CGAAGCCGCG CTCCGGCTAC
TTCGTGCGGC GCCGCGCGGC GGTCGCGCTC GCAACGCTGC CGGAAAGCGA CGGGCCGCCG
CTGAGCGTCG AGCCGCCGTT CGCGGGCCTG CACGAACGTG TGTCGCGCGT GATCGATCGC
GCGAACGCGG CGCCCGATGC GCTGAATCTC GGCGGCGCGT CCGCGCTGGC CACGCTGTAT
CCGGCCGAGC GCCTGCAGGC GCTCGCGATC CGGCTGTTAC GGCGCAAACC CACGTTGCTG
ACCGACGCGG GGCCCGTCGG CGGTTCGCCC GAGTTCCGGC AGACGATGGC CAAGCGCGCG
CTGTCGTATG GCGTGACGGT GACGCCGGAC GACGTGATGT CGACGAGCGG CGGCGTCGAT
GCCGTGAATC TCGCATTGCG CGCGGTGGCG CGCCCCGGCG ACACGATCGC GATCGAATCG
CCGGCCTTCT TCGGCTTGAT CCAGTTGCTC GAAAGCCTCG GCTTGCGTGC GCTCGAAATC
CCGGCCAGCC CGACAACCGG CCTGTCGATC GAGGCGCTCG AAGTGGCGCT GACCGCGTAC
CCGGACATTC GGGCCGTGGT CGTCGTGCCG AACCTGCAGA ACCCGCTCGG CTGCGTGATG
CCCGACGAGC GCAAGGCTGC GCTCGTCTCG CTCTGTTCGC GCCACGGCGT GGCCGTGATC
GAGGACGAGC CTTATCGCGA GCTCGTCGAG GCGCCGCAGC CGGTCAAGCC GGTGAAGGCA
TGGGACCGCG ACGGCACGGT GATCTACTGC CCGTCGTTCA ACAAGGTGCT GGCTCCCGGG
ATGCGGCTTG GCTGGATCAG CGCGGGGCGC TGGCACGCAC GCGTGAAGAT GCTGAAGTTC
GCGCACAGCC GGCACAACGC CGCGTTGCTG CAGGCCGTTG CGGCCGAATT CGTCGGCTCA
GGCGCGTTCG ATCGCCATCT GCACCGGTTT CGCGAACAGT TGCGCGTGCA GCGCGACGTG
ACGATCGATG CGATTGCACG GCATTTCCCG GCCGGAACCC GGATGAACCA GCCGCCGGGC
GGGATGCTGC TGTGGATCGC GCTGCCGGAC GGCGTGCGCT CGGAGCCGCT GTTCGACGCC
GCGCTCGCGC ACGGCGTCAG AATCGCGCCC GGCTCGATCT TCTCGAATTC CGACCGCTTC
GACGGCTATA TCCGGCTCGC TTGCACGCGC GTGTTCGATG CGGCGCACGA AGCGGCGTTC
GAAACGCTGG GCCGCCTCGT ACGGGAAGCC ACCGCGGCCA CGTAA
|
|---|
| Protein sequence | MTPFTDSSRP PLPMDGEPLY ERLAEHYRRI IAAGTLSPGD RMPSVRAFMA QHGVSLSTAI
QAFRRLEDTG WCEAKPRSGY FVRRRAAVAL ATLPESDGPP LSVEPPFAGL HERVSRVIDR
ANAAPDALNL GGASALATLY PAERLQALAI RLLRRKPTLL TDAGPVGGSP EFRQTMAKRA
LSYGVTVTPD DVMSTSGGVD AVNLALRAVA RPGDTIAIES PAFFGLIQLL ESLGLRALEI
PASPTTGLSI EALEVALTAY PDIRAVVVVP NLQNPLGCVM PDERKAALVS LCSRHGVAVI
EDEPYRELVE APQPVKPVKA WDRDGTVIYC PSFNKVLAPG MRLGWISAGR WHARVKMLKF
AHSRHNAALL QAVAAEFVGS GAFDRHLHRF REQLRVQRDV TIDAIARHFP AGTRMNQPPG
GMLLWIALPD GVRSEPLFDA ALAHGVRIAP GSIFSNSDRF DGYIRLACTR VFDAAHEAAF
ETLGRLVREA TAAT
|
|---|
| |