| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1870 |
|---|
| Symbol | |
|---|
| ID | 3753635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 2140675 |
|---|
| End bp | 2141691 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637766719 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_372628 |
|---|
| Protein GI | 78062720 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0281509 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.341017 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT ATTTCTTTTC CGGATCGGAG TTGTGTAAAT TCATTTTCAC TATCCTTGCA
ATAACCCTTC GCATGACGCC TCTCGTTCCG CACGACGCCA GTCAAGACGA ACCCGCGATT
GCCGAGCGGA TCGCGTCGGC GATGCCGTTG ATGACGCCGA TCCATCGCCG CATGGGCGAG
TTCGTGCTCG CGAACCCGTT CCGCGCGGCG ACGATGCGGA TCGACGAACT CGCGCAGGCC
GTGAACGCGT CGATCGCGAC CGCGAACCGC TTCGCGAAGG CGCTCGGTTT CGACGGCTAT
CCGGCGATGC GCGCGGCGCT GGTGCGTGGC TTCGAGGCGA CGCTCGGGCC GGTCGAGCGG
CTGCGTTCCG CGCAGGAGCA GGAGCCTGGC GTACGTGGCG CCGTCTGGAT CGACGCGGTA
TTCGACCAAG CCGTCGCGAA CATCGAGAAC ACGCGTGCGC AGCTGGATGC AGCCGATGTC
GAGGCCGCGG TCGAGGCGAT CGTCGGTGCG CGTCGAGTGC TGATCCTCGG CGCGGGGTCG
AGCGCGTTTC TCACCGGGCT GATGGAGCAC GGGCTGTCCG TCTGCCATGA CAACGTGCAG
TCGCTCGCGT TGCTCGGCGG CCCGTCGCAC GCGGCGCGGC GCTTGTATAC GGCCGACTCG
CGCGATCTCG TGATCGCGCT CGCGTTTCCG CGCTACGTGA AGGACACGAT CGAACTCGCC
CGCCGCGCGG CCGCGCGCGG TGCACGCGTG CTGGGTATCT CCGACGGCCC GCAATCGCCG
CTTGCGCCGA TCGCGTCGCT GAACCTGTAC GTCAAGGCCG AACGTCGCTT CGCGGCCACG
TCGGAAGCGG CCGTGCTCGC GATGATCGAG GCGCTGATCG ACGCGGTCGC GCTGCGCACG
CACCGGTCCG CGAAATCCGC GGCCGAGATG ACCGAATTCC TGCTGCCGTG GCTCATGCAG
CCGCAAGCGA CGCCACCGGC AGCCAATCCT TCTACTCACC GTCCGAAAAA AACATGA
|
|---|
| Protein sequence | MKIYFFSGSE LCKFIFTILA ITLRMTPLVP HDASQDEPAI AERIASAMPL MTPIHRRMGE
FVLANPFRAA TMRIDELAQA VNASIATANR FAKALGFDGY PAMRAALVRG FEATLGPVER
LRSAQEQEPG VRGAVWIDAV FDQAVANIEN TRAQLDAADV EAAVEAIVGA RRVLILGAGS
SAFLTGLMEH GLSVCHDNVQ SLALLGGPSH AARRLYTADS RDLVIALAFP RYVKDTIELA
RRAAARGARV LGISDGPQSP LAPIASLNLY VKAERRFAAT SEAAVLAMIE ALIDAVALRT
HRSAKSAAEM TEFLLPWLMQ PQATPPAANP STHRPKKT
|
|---|
| |