| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1823 |
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| Symbol | |
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| ID | 3753588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | - |
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| Start bp | 2078291 |
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| End bp | 2082289 |
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| Gene Length | 3999 bp |
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| Protein Length | 1332 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637766672 |
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| Product | hypothetical protein |
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| Protein accession | YP_372581 |
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| Protein GI | 78062673 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA TTCTCTCGTT TCTACGCTCG CGTCATCTAT GGGCAGTCGT GACGGTGATC
GTTGCTGCTG CCGCGATCTG GTTTGCGGGG CCAATGGTGA GTTTCGGTGG GCTGAATCCA
CTCGCGTCGG TCGGCATTCG ACTGACTTTG ATCGCCTTGG TGCTCGCCGT ATGGATCCTG
TGGCTGATCG ACTGGTCGAC GAGCATTGTT TTCGTCGCGC TGCTCTGTCT CGCGATCTGG
TATGCCTTTC CACTTGTGAC GTTGGCCGGC AAACCGCTAT TTGCATCCGT GATGGCCCGC
ATGCTGTCAA TGGCCGGTGT TGTGTTCGTG TATGCCGTGG CTATGTCGAT CCGATGGTGG
AAGCGCATAC GCCGGCATCC GGGCCAGCTC AGGCGTTTGC TTCGACTCGG TAAGCGTGGC
GTCCGGCCGC TGGCCGCATC GCGCCTGGTG GAGATCGAAG ACATGGCCAG GACAGCGATC
AAGCAGTTGA AAGCCCGGCG CGGGGGGGCC TGCAGATTGG CGCGACTGTT TCGAGGGCCA
GCGTATCTCT ACGATGTGCC GTGGTATGCC GTGCTGGGCT CGAAGGGTTC GGGCAAGACC
ACGGCGCTGT CAAACGCGGG CCTGGCATTC CCGCTTGATG GACAACTTCA GCATTCGCTC
GCGCCCGATG ACGCCCGGGC TTTGCCGGGT TGGCGGATAA CCAACGAGGC CGTGCTGATT
GATACGGCTG GCCACTACGT CCGGCACGGC ACGTCGCGCT ACCGTCTGAC AGCGGAACTG
TCGGATACCC GGAATGAGGG GACACGCAAC AAGCGGCCGA CCGACACAAG CACTGCCCGC
GAGCAGACCG ATGCGGCGGA ATGGAAAGGA TTTCTTCGAC TGCTTCGCCG TATCCGGCCC
CGACTGCCGC TGAATGGCGT GCTGTTGACA ATCAATGTCG CTGCCTTGAC GCACGCGGAT
CTCAACGTAC GCGCGGCCGA GAGCCGCGCA TTGCGGGCGC GGCTCGATGA GATGCAAGCC
GAGTTCGGGA CTGAATTTCC CGTCTGGCTG ATTGTCACGA AGTTAGACCG GTTGCCGGGC
TTCACTGACT ATTTCGCGTC ACTCGAGGAA CTGGAGCGTG CGCAGATATG GGGCGTGACG
TTGCGGTCCG ACCCGGAGGG GCGGACGGCC AATACGGTCA AGACGGAACT GAACCTGCTC
GCGTCGCGTC TCGCAGATGG CGTGAGTGGT CTGCTTCGCA ATGAAGCCGA TGTGGCACGT
CGTCGCCGTC TGGCGATGCT GCCAGAGGCA TTTTCGGCAC TCGTGAACCC GTTGGCAGAC
CTGATCGGGC AAGTGTCCGT CGAGGGCGAC AAGAGTGCGC CAGCGGTACC GAATTCAATG
CTCCGAGGTG TTTACCTGAC GAGCGCAAGT CAGACCGGCC AGCACGTCGT CGCGGATCGG
AAAACGCTGT TGCAACGCAT GATCGGCGCA TCCGGTGCGC AGTCGAATGA CAGGCGAGGA
GAGCGTGGCG AAACCAGCTA CTTCCTGCGC GACCTGTTTG TCGGGATCGT ATTTCGCGAG
GGGCATCTCG CATGTCCGAA CCGGAATCGG GAGCATCGTG CGCGACTGCA GCGGTGGCTG
GGACACTCGC TTGTGTGGCT GATCGCCGTG GGGTTAGGTG CAAATCTCTG GAGCACCTTC
ACCGTGGAAC GGACGGCCCT TGCTACGCTA GGACAAAAGG CACGCTCACT GGCCGCGCTG
CTTGCACGAA GCGACCTTTC TACTGGTCCT GAGCGTGTTC CGATGGTGTT GGACAGTGCA
AACGAATTGT TGCGTGACAC AACGCGCCTC GTCGCCAATC CCGACGTCGC ATTTCGATTC
GACGCGGACC GGTTCGACAT GATCGAGTCT GGAAGTCGTC ACGTATACGA GGCTCTGTCG
GAGCAGGTTG TATTGCCGAA CATAGTCCGC AGGATGGAGG CCGTGATTAA CGACGCCGCG
GCGAGCGGTG ATGCCGCGGC TGCGTACGAT ACGTTGCGCG TGTACCTGAT GCTCTACGAC
AGGGCACGGT TCAACGCGAA CGACGTCAGG ATGTGGGTGC TGGAGGATTG GGCACGTTAC
GACAGTGCGG CAATGTTCGG TGGGCGCGCC GCAATGATCG ATCACGTGCA GCGACTGTTC
TCCGAGGGAC ACGTGGTGCA GTCGCCACTG TCCCGTAACG AACGGCTTAT CCGGCAGGCG
CGTACATTTC TCGATGGCAG CAATCCAGTC GATCGTCTGT ATCAGCGCGC GAAAGCGGCG
ATGTTGAAAC ACGCGCCCGA CGAGTTTTCA CTGCTGCGCG TGGTTGGACC ACAAGCAGGT
GTCGTGTTTA CGCGGGCCAG CGGAGCATCG TTGTCCGGCG GCGTACCAGG ACTCTTTACG
CTGGACGGAT ATCGGGCGAT GTTCGACAAA CGCCTGCCGG AGTTTCTTCA GAAGGCAAGC
GACGACGATG CCTGGGTTAT GGGGCGTCGG ACGCTGGGTG ATTCCCCGGG AAATTCGGCT
GGGGTGCTGA ACGCGTCGAG TCGAGATGGG GGCGCGCTGT CGATGGCGAT CAGGCGCCTG
TACCTGGCGG AGTACGCTCA ACAATGGGAT GCGTTTCTTG ACGACATTCG TGTCGTCAGC
GGAACGAGCC TTGCCTTCAG CTTGAAGGTG CTGCGGACTT TCGCTGCACC AGATTCACCG
CTGACGCGTC TCGCACGCGC GGCGGCACGC GAAACGACGC TGACACAGCC ATTGGCGAGA
GCAGACGGCT CCTTCCTTGA AAGAGCGACC GACGCCGTCA ACCAGCAGGC CGAAAAGATA
CTGGGACCTC GCGCGTCGGA ACAGGTTGAG CGCGAGTTGG TCGATAGCCA TTTCGCGGCA
TTGCGTGAGG TCGTGACTGG CCATGCCGAT GTGTTGTCGG ATACGCAGTT GTCCAGCTCC
CCTGCGGAGA AAACGGGCCT GGATGGCGTC ACCGATCTGT TGAACGATTA CTACACGACA
CTCACGATTT CCGACAATGC GCTGTTGAAC AACAGCATGC CGCCGAAAAG CGAGAGTGCT
GCAAAGCTCA AGATGACGGC TGACACGATG CCGGCGCCGT TCCGGGCAGT CTTGCGTCAA
CTCGCTGTCG ATGGCTCACG TGGCGTGAAT CAGGGTATCG GCCAGTTACT GTCGCGCCAG
ATGCAGGCGG TAGTTGCAGA CACCTGTCGA ATGACGATCG AAGGCAACTA TCCGTTCTCG
CCTGATAGCA AGCGTGACGT CAGCATTGAC GATTTCACTC GGGTGTTTGC ACAAGGCGGC
GTGATCGACG ATTTCTTCAC GAAAACGCTT GCACCGTTCG TCGACACGGC CGCGAAGCCG
TGGCGCTACC GGACGCTGCC GGGCGCGACT GAACCCGTGC AGGGGCCGGA CCTGGAACCG
TTCGAGCATG CGAAGGCGAT CCGCGACATT TTCTTCAACG ATTCTGATCG GAAGAAACCG
GGCTGGAAGG CTGACATCCG AATTCCTGAA CTCGACCCGA CGATCATGAG CCTGTCGCTC
GACCTCGACG GACACACGAT ACTCTACCGA CATGGTCCAG TCGCGCCTTT CACGGTGACA
TGGCCGGGAC CGCGTGGCGG TGTCCACGCT CAGATCATGG CGAGCCCGCC CATCCGGCCA
GACACGTCGA CGATCGCCGC AGACGGGCCG TGGGCGCTGA TGCGGGTGCT CCGGAAAGGT
CGTGTGGTCG AGGCAGCTGC ACCTGGCCGC ACGCGAATCA CGTTCAGTTT TGACGGTCGG
GAAGCGGCAC TCGACATCGC GAGCGCGGGA AGTGTCGCGA ACCCGCTGAC AAGCGATGTG
CTGACGACGT TCCGGTGTCC GAGCACGATG CCTATGTTCA ATCTGCCGGA CAGTGGCCCT
CCGGTGGGGC TGTCGCGCGG ATCGATTCCG GTGGTCCAGA AAGGGGAGCG TGCCGCGATG
TCTTTAACAA CCGTGTTGCA AGCCAAGGGT AATCGATGA
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| Protein sequence | MKKILSFLRS RHLWAVVTVI VAAAAIWFAG PMVSFGGLNP LASVGIRLTL IALVLAVWIL
WLIDWSTSIV FVALLCLAIW YAFPLVTLAG KPLFASVMAR MLSMAGVVFV YAVAMSIRWW
KRIRRHPGQL RRLLRLGKRG VRPLAASRLV EIEDMARTAI KQLKARRGGA CRLARLFRGP
AYLYDVPWYA VLGSKGSGKT TALSNAGLAF PLDGQLQHSL APDDARALPG WRITNEAVLI
DTAGHYVRHG TSRYRLTAEL SDTRNEGTRN KRPTDTSTAR EQTDAAEWKG FLRLLRRIRP
RLPLNGVLLT INVAALTHAD LNVRAAESRA LRARLDEMQA EFGTEFPVWL IVTKLDRLPG
FTDYFASLEE LERAQIWGVT LRSDPEGRTA NTVKTELNLL ASRLADGVSG LLRNEADVAR
RRRLAMLPEA FSALVNPLAD LIGQVSVEGD KSAPAVPNSM LRGVYLTSAS QTGQHVVADR
KTLLQRMIGA SGAQSNDRRG ERGETSYFLR DLFVGIVFRE GHLACPNRNR EHRARLQRWL
GHSLVWLIAV GLGANLWSTF TVERTALATL GQKARSLAAL LARSDLSTGP ERVPMVLDSA
NELLRDTTRL VANPDVAFRF DADRFDMIES GSRHVYEALS EQVVLPNIVR RMEAVINDAA
ASGDAAAAYD TLRVYLMLYD RARFNANDVR MWVLEDWARY DSAAMFGGRA AMIDHVQRLF
SEGHVVQSPL SRNERLIRQA RTFLDGSNPV DRLYQRAKAA MLKHAPDEFS LLRVVGPQAG
VVFTRASGAS LSGGVPGLFT LDGYRAMFDK RLPEFLQKAS DDDAWVMGRR TLGDSPGNSA
GVLNASSRDG GALSMAIRRL YLAEYAQQWD AFLDDIRVVS GTSLAFSLKV LRTFAAPDSP
LTRLARAAAR ETTLTQPLAR ADGSFLERAT DAVNQQAEKI LGPRASEQVE RELVDSHFAA
LREVVTGHAD VLSDTQLSSS PAEKTGLDGV TDLLNDYYTT LTISDNALLN NSMPPKSESA
AKLKMTADTM PAPFRAVLRQ LAVDGSRGVN QGIGQLLSRQ MQAVVADTCR MTIEGNYPFS
PDSKRDVSID DFTRVFAQGG VIDDFFTKTL APFVDTAAKP WRYRTLPGAT EPVQGPDLEP
FEHAKAIRDI FFNDSDRKKP GWKADIRIPE LDPTIMSLSL DLDGHTILYR HGPVAPFTVT
WPGPRGGVHA QIMASPPIRP DTSTIAADGP WALMRVLRKG RVVEAAAPGR TRITFSFDGR
EAALDIASAG SVANPLTSDV LTTFRCPSTM PMFNLPDSGP PVGLSRGSIP VVQKGERAAM
SLTTVLQAKG NR
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