Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B1728 |
Symbol | |
ID | 3753493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | + |
Start bp | 1966170 |
End bp | 1967699 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637766577 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_372486 |
Protein GI | 78062578 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.141114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTCC GCCGGCGGCC TGCCGCCACT GCCACGTCGG TCGCCACTGC CGTTGCGCTC GCAGCCGCCC TCACCGGCTG CACGGTTGGC CCCGATTACA AGCGGCCCGA CGTCGACACG CCGGCCGCAT GGCGGCTCGA TCCGGCGGAT TCGTACTGGC ATCCGGCCGC GCCGGCGAGC GCGCCGCTCG ACCCCGCATG GTGGACCGCG TTCGGCGATC CGCAGCTCGA TGCACTGGAA GCTGAAGCGC TGCGCAACAA CCAGAACCTG AAGGCCGTCG CCGCGCGCTA CGACCAGGCG AAGGCGACGC TCGCGTCGGT CGCCTCGGCG CAGTATCCGG CCGTCGGCCT GAACGCGAGC GGCCAGCGCT TCAAGATCTC GGCCGACCGG CCGCAGACCA ACTACGCGAC GCAAAGCACG TCGACCGTGC AGAACGACGT CCAGGTCGGC GCGGCCGTCA GCTACGAACT CGACCTGTTC GGCCGCGTGC GGCGCAGCGT CGAATCGGCG CAGGCGACCA CCGAGCAGGC CGGCGACGAT TTCGCGAACG CCCGCCTGGT GCTGACCGCC GATCTCGCAT CGAGCTATTT CGCGCTGCGT GAATTCGACA CCGAGATCGA CGTCGTCAAG CGTTCGATCG ATCTGCAGCA GAAGGCGCTC GACTACGTGA GCGCGCGCCA CGACCTCGGC GCGGTGTCGG GCCTCGATCT GCTGCAGCAG CGCGCGCAGC TCGACGCGAC GCGCACGCAG GCGCAACTGC TGCTCCAGCA GCGCGTGCAG GTCGAAACCG CGATCGCGAC GCTGGTCGGC ACGCCGGCCC CCGCTTTCTC GATCGCACCG CGCGTCGTGC CGATCAACGC GCCGGCGCTG CCGACCGGCC TGCCGAGCGA CGTGCTGCAG CGGCGCCCCG ACGTCGCGTC GGCCGAGCGC GCGATGGCCG CCGCGAATGC GCAGATCGGC GTCGCGCGCG CCGCATATTT CCCGCGCATC ATGCTGTCGC CCGATATCGG CTGGGATGCC ACGCGCTTCG CCGGCCTGTT CACCGTGCCG GCGTTGCTGT GGTCGGTCGG CGGGTCGCTC AGCCAGCCGC TGTTCGAAGG CGGCAAGCTG AAGGCCGGCG TCGATTTCGC GCAGGCCGGC TATGTCGCCG CGCAGGCCAG CTACCGGCAG ACCGTGCTCA CCGCGTTCCA GGAGGTGCAG AATGCGGTCA CGGGATTGTC GGTGCTCGCC GACGCCGCGC AGCAAGCCTC CGCGGCCGTC GACGACGCGC GCAAGCTCGT GTCGCTCGCG CAGGATCGTT ACGCGGGCGG CCTGACGCCG TTCATCGACG TACTGACGGC CCAACAGCAG TTGCTGACGA GCGAGCGACA GGCCGTGCAG ATCCAGGGCC AGCGCGCGGC GCTCGTCGTG TTTCTCGCGA AGGCGCTGGG CGGCGGCTGG GATGGCCATG CCGCGGGCGG CCCCGCGCCG GCCGAGGTCG CGACGGCAGC CCCGGCGCCG GCCCCGGCCC CGGCGCACCC GAGCCCTTAA
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Protein sequence | MRLRRRPAAT ATSVATAVAL AAALTGCTVG PDYKRPDVDT PAAWRLDPAD SYWHPAAPAS APLDPAWWTA FGDPQLDALE AEALRNNQNL KAVAARYDQA KATLASVASA QYPAVGLNAS GQRFKISADR PQTNYATQST STVQNDVQVG AAVSYELDLF GRVRRSVESA QATTEQAGDD FANARLVLTA DLASSYFALR EFDTEIDVVK RSIDLQQKAL DYVSARHDLG AVSGLDLLQQ RAQLDATRTQ AQLLLQQRVQ VETAIATLVG TPAPAFSIAP RVVPINAPAL PTGLPSDVLQ RRPDVASAER AMAAANAQIG VARAAYFPRI MLSPDIGWDA TRFAGLFTVP ALLWSVGGSL SQPLFEGGKL KAGVDFAQAG YVAAQASYRQ TVLTAFQEVQ NAVTGLSVLA DAAQQASAAV DDARKLVSLA QDRYAGGLTP FIDVLTAQQQ LLTSERQAVQ IQGQRAALVV FLAKALGGGW DGHAAGGPAP AEVATAAPAP APAPAHPSP
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