Gene Bcep18194_B1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B1728 
Symbol 
ID3753493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp1966170 
End bp1967699 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content72% 
IMG OID637766577 
ProductRND efflux system outer membrane lipoprotein 
Protein accessionYP_372486 
Protein GI78062578 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.141114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCC GCCGGCGGCC TGCCGCCACT GCCACGTCGG TCGCCACTGC CGTTGCGCTC 
GCAGCCGCCC TCACCGGCTG CACGGTTGGC CCCGATTACA AGCGGCCCGA CGTCGACACG
CCGGCCGCAT GGCGGCTCGA TCCGGCGGAT TCGTACTGGC ATCCGGCCGC GCCGGCGAGC
GCGCCGCTCG ACCCCGCATG GTGGACCGCG TTCGGCGATC CGCAGCTCGA TGCACTGGAA
GCTGAAGCGC TGCGCAACAA CCAGAACCTG AAGGCCGTCG CCGCGCGCTA CGACCAGGCG
AAGGCGACGC TCGCGTCGGT CGCCTCGGCG CAGTATCCGG CCGTCGGCCT GAACGCGAGC
GGCCAGCGCT TCAAGATCTC GGCCGACCGG CCGCAGACCA ACTACGCGAC GCAAAGCACG
TCGACCGTGC AGAACGACGT CCAGGTCGGC GCGGCCGTCA GCTACGAACT CGACCTGTTC
GGCCGCGTGC GGCGCAGCGT CGAATCGGCG CAGGCGACCA CCGAGCAGGC CGGCGACGAT
TTCGCGAACG CCCGCCTGGT GCTGACCGCC GATCTCGCAT CGAGCTATTT CGCGCTGCGT
GAATTCGACA CCGAGATCGA CGTCGTCAAG CGTTCGATCG ATCTGCAGCA GAAGGCGCTC
GACTACGTGA GCGCGCGCCA CGACCTCGGC GCGGTGTCGG GCCTCGATCT GCTGCAGCAG
CGCGCGCAGC TCGACGCGAC GCGCACGCAG GCGCAACTGC TGCTCCAGCA GCGCGTGCAG
GTCGAAACCG CGATCGCGAC GCTGGTCGGC ACGCCGGCCC CCGCTTTCTC GATCGCACCG
CGCGTCGTGC CGATCAACGC GCCGGCGCTG CCGACCGGCC TGCCGAGCGA CGTGCTGCAG
CGGCGCCCCG ACGTCGCGTC GGCCGAGCGC GCGATGGCCG CCGCGAATGC GCAGATCGGC
GTCGCGCGCG CCGCATATTT CCCGCGCATC ATGCTGTCGC CCGATATCGG CTGGGATGCC
ACGCGCTTCG CCGGCCTGTT CACCGTGCCG GCGTTGCTGT GGTCGGTCGG CGGGTCGCTC
AGCCAGCCGC TGTTCGAAGG CGGCAAGCTG AAGGCCGGCG TCGATTTCGC GCAGGCCGGC
TATGTCGCCG CGCAGGCCAG CTACCGGCAG ACCGTGCTCA CCGCGTTCCA GGAGGTGCAG
AATGCGGTCA CGGGATTGTC GGTGCTCGCC GACGCCGCGC AGCAAGCCTC CGCGGCCGTC
GACGACGCGC GCAAGCTCGT GTCGCTCGCG CAGGATCGTT ACGCGGGCGG CCTGACGCCG
TTCATCGACG TACTGACGGC CCAACAGCAG TTGCTGACGA GCGAGCGACA GGCCGTGCAG
ATCCAGGGCC AGCGCGCGGC GCTCGTCGTG TTTCTCGCGA AGGCGCTGGG CGGCGGCTGG
GATGGCCATG CCGCGGGCGG CCCCGCGCCG GCCGAGGTCG CGACGGCAGC CCCGGCGCCG
GCCCCGGCCC CGGCGCACCC GAGCCCTTAA
 
Protein sequence
MRLRRRPAAT ATSVATAVAL AAALTGCTVG PDYKRPDVDT PAAWRLDPAD SYWHPAAPAS 
APLDPAWWTA FGDPQLDALE AEALRNNQNL KAVAARYDQA KATLASVASA QYPAVGLNAS
GQRFKISADR PQTNYATQST STVQNDVQVG AAVSYELDLF GRVRRSVESA QATTEQAGDD
FANARLVLTA DLASSYFALR EFDTEIDVVK RSIDLQQKAL DYVSARHDLG AVSGLDLLQQ
RAQLDATRTQ AQLLLQQRVQ VETAIATLVG TPAPAFSIAP RVVPINAPAL PTGLPSDVLQ
RRPDVASAER AMAAANAQIG VARAAYFPRI MLSPDIGWDA TRFAGLFTVP ALLWSVGGSL
SQPLFEGGKL KAGVDFAQAG YVAAQASYRQ TVLTAFQEVQ NAVTGLSVLA DAAQQASAAV
DDARKLVSLA QDRYAGGLTP FIDVLTAQQQ LLTSERQAVQ IQGQRAALVV FLAKALGGGW
DGHAAGGPAP AEVATAAPAP APAPAHPSP