| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1727 |
|---|
| Symbol | |
|---|
| ID | 3753492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 1964935 |
|---|
| End bp | 1966164 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637766576 |
|---|
| Product | HlyD family secretion protein |
|---|
| Protein accession | YP_372485 |
|---|
| Protein GI | 78062577 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0767982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAGA AACATCACAG CTCCGTCGGC ATCCAGGTAG ACGAACGCGG CATGCACCTG
CCGACGCGCA CGTCGGTGTC GCGACGCGGG AAGATCGTCC TGATCGTGAT CGGCGTGCTG
CTGGCCGCCG GCGCCGCGCG CACGGTCGTC GTCAACGTGC TGAACCGCAA CCGGCTCGAC
GCCGTTGCCG AGCAGAACAC GCGCCAGTAC GTGACCGTCG TGCATCCGGT CGATGCGGCC
ACCGGCGGCA AGCTGACGCT GCCCGGCACG CTGCGCGGCT TCGTCGAGGC GCCGATCTAC
GCCCGCGCGA GCGGCTACGT GCTGCGCTGG CAGGCCGACA TCGGCGCGCA CGTGAAGCAG
GGGCAGACAC TCGCCGAACT CGACACGCCC GAGCTGAACC AGGAACTCGC GCAGGCCACC
GCGCAGCGCC AGCAGGCGCA GGCCGCCCTC GCGCTCGCGA AGACGTCGTT CGACCGCGCG
CAGCAGTTGC GCCAGCGCGA TGCGGTCTCG CAGCAGGAGC TCGACGACCG GCAAGGCGCG
TTCAATCAGG GCACCGCGAA CCTCGCTGCG GCCGATGCGA ACATGCGCCG CCTCACCGAG
CTGAAAGGCT TCCAGCGGAT CGTCGCGCCG ATCGACGGGA TCGTCACGCA GCGCAACGTC
GACGTCGGCG ATCTCGTCAG CTCCGGCAAC GCCGGCCGCT CGCTGTTCAC GGTCGTGCAG
GCCGACCAGC TGCGCCTCTA CGTGCAGGTG CCGCAGGCGT ACGCGCAGCA GGTGAAGGTC
GGCCAGCACG TGAGCGTCGC GCAGGCGGAG CTGCCGGGCC GGACCTTCGA CGGGACGATC
ACGCGCACGT CCGAGGCGAT CGACGTCGCG ACGCGCTCGT TGCAGATCGA AATCACGCTG
CCGAACCCGG ACGGCCGCCT GCTGCCCGGC GCGTACGTGC AGGCCACCTT GCCGATGACG
CCGGTCGGCC GCCTGCAGGT GCCGGCCAAT ACGTTGCTGT TCCGCGCCGA AGGCCCGACT
GTCGCAGCCG TCGACGCGAA CGGCCAGGTG CGCCTGAAAT CGGTGACGGT CGTGCGCACG
ATCGGGCAGA CGCTCGAAGT CGACGGCCCG CTCACGCCGA ACGACCGCCT CGTCACGAAC
CCGAGCGACG CGCTCGCGAA CGGCGACCAG GTGATCGTCT CGGCGCCGGC CGCGAAGCCG
GCCTCCGGCG CCACGGAGGC GAAGTCGTGA
|
|---|
| Protein sequence | MEEKHHSSVG IQVDERGMHL PTRTSVSRRG KIVLIVIGVL LAAGAARTVV VNVLNRNRLD
AVAEQNTRQY VTVVHPVDAA TGGKLTLPGT LRGFVEAPIY ARASGYVLRW QADIGAHVKQ
GQTLAELDTP ELNQELAQAT AQRQQAQAAL ALAKTSFDRA QQLRQRDAVS QQELDDRQGA
FNQGTANLAA ADANMRRLTE LKGFQRIVAP IDGIVTQRNV DVGDLVSSGN AGRSLFTVVQ
ADQLRLYVQV PQAYAQQVKV GQHVSVAQAE LPGRTFDGTI TRTSEAIDVA TRSLQIEITL
PNPDGRLLPG AYVQATLPMT PVGRLQVPAN TLLFRAEGPT VAAVDANGQV RLKSVTVVRT
IGQTLEVDGP LTPNDRLVTN PSDALANGDQ VIVSAPAAKP ASGATEAKS
|
|---|
| |