| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1679 |
|---|
| Symbol | |
|---|
| ID | 3753444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 1908623 |
|---|
| End bp | 1909765 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637766528 |
|---|
| Product | outer membrane protein (porin) |
|---|
| Protein accession | YP_372437 |
|---|
| Protein GI | 78062529 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.537554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.868597 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAAA CCCTCATCGC CGGCGCATGC ACCGCCGCGC TGTTCGCCCC CGTCGCTCAC
GCACAGAGCT CGGTCACGCT GTACGGCCTG ATCGACGCCG GCATCGTCTA CACCAACAAC
GCCAACGGTG CGTCGCTGTG GCGCCTGAAC AGCGGCACCG TCAACGGCAG CCGCGTCGGG
TTTCGCGGCA CCGAGGATCT CGGCGGCGGC CTGAAGGCGC TGTTCGTGCT CGAGAACGGC
TTCAACGTGA ACAACGGCGG GCTCGGGCAG GACGGCAAGC TGTTCGGCCG TCACGCGTAC
GTCGGCCTGA GCCAGAACGG CTATGGCACG CTGACGCTCG GCCGCCAGTA CGACACGATG
GTCGACTTCG TCGCGCCGCT GTCGGCCACG GCCGGCGACT TCGGCGACGC GAGCTTCGCG
CATCCGTTCG ACAACGACAA CCTGAACCAC TCGCTGCGCA TCAACAACGC GGTCAAGTAC
ACGAGCGAGA CCTATGCGGG CTTCAAGGTC GGCGCGATGT ATGCGTTCTC GAACGCGACG
AACTTCGGCG CGAACCGCGC GTACAGCGTC GCGGCGAGCT ACACGAACGG CCCGCTGAAG
CTGGCCGGCG CGTACCTGCA GATGAACGGC ACGAAGGGCT CGACGAGCGC GAGCCCCGGC
GCGACCGATG CGGCCGAAGC GAAGAGCCTG AACCAGGGCG GCTGGTCGAT CGGTTCGGAC
CGCATGCGTT CGTACGGCGG CGGCATCAGC TACGGATTCG GCCCGGCCAC CGTCGGCTTC
GTCTATACGC GTTCGCAGTA CGACAACACG GGCTCGTTCG GCTCGACCGG CCAGGTCGCG
TTCAACAACT ACGACGTGAA CGTGCGCTAT GCGGTGACGC CGGCCGTCAG CCTCGGCGCG
GCCTACGTGT ACACGGACGC CAGCGTGTCG AACCCCGACA GCAAGCACGG CACCGATCCG
AAGTGGCACC AGGTCGACCT GCAGGCCGTC TACAAGCTGT CGCGCCGCAC GGACGTCTAC
GCGGAAGCGA TGTATCAGCA CGCAGCGGGC CGCGGCTACC AGGCGTTCAT CAACGGCTCG
GGCGGCGCAT CGAGCACGGC GAACCAGATC GTCGGCACGA TCGGCATGCG CACGCGCTTC
TGA
|
|---|
| Protein sequence | MKKTLIAGAC TAALFAPVAH AQSSVTLYGL IDAGIVYTNN ANGASLWRLN SGTVNGSRVG
FRGTEDLGGG LKALFVLENG FNVNNGGLGQ DGKLFGRHAY VGLSQNGYGT LTLGRQYDTM
VDFVAPLSAT AGDFGDASFA HPFDNDNLNH SLRINNAVKY TSETYAGFKV GAMYAFSNAT
NFGANRAYSV AASYTNGPLK LAGAYLQMNG TKGSTSASPG ATDAAEAKSL NQGGWSIGSD
RMRSYGGGIS YGFGPATVGF VYTRSQYDNT GSFGSTGQVA FNNYDVNVRY AVTPAVSLGA
AYVYTDASVS NPDSKHGTDP KWHQVDLQAV YKLSRRTDVY AEAMYQHAAG RGYQAFINGS
GGASSTANQI VGTIGMRTRF
|
|---|
| |