| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1630 |
|---|
| Symbol | |
|---|
| ID | 3753395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 1855688 |
|---|
| End bp | 1857988 |
|---|
| Gene Length | 2301 bp |
|---|
| Protein Length | 766 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637766479 |
|---|
| Product | Rad3-related DNA helicases-like |
|---|
| Protein accession | YP_372388 |
|---|
| Protein GI | 78062480 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1199] Rad3-related DNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.138986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.527518 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTACG TCGTCGCGGT GCGGGCGATG TGCGAGTTCA CCGCGCGACG CGGCGATCTC
GACCTGCGCT TCACGCCCGC GCCGACCGCG CTCGAAGGCA TCGCCGGCCA CGGTGCGGTC
ACGTCGAATC GTGGCGCACG CTACGAAACC GAGATCGCGC TGACGGGCAC CTGGGGCACG
CTCACCGTGC GCGGTCGCGC GGATGGCTAC GACCCGGTGG CGAATCGCCT GGAGGAGATC
AAGACCTATC GCGGCAGCCT CGATGCGATG CCGGCCAATC ACCGCGCGCT GCACTGGGCG
CAGGCGAAGG TCTATGCGCA CCTGCTGTGC GACGCGCGCG GCTTCCAGGA AATCGATGTC
GCGCTCGTCT ATTTCGACAT CGTGTCCGAA CGCGAGACGG TGCTGACGCA AACGCTGGGA
GCGGCTGAAC TCGCGACGTT CTTCGCCGAG CAGTGCGCGT GCTTCGTCGG CTGGGCGGAG
CGCGAGACGG CCCACCGCAC GGCGCGCGAT GCAGCGCTGC GCGCGCTCGC GTTTCCGCAC
GGGCAGTTCC GCAGCGGCCA GCGCGAGCTG GCGGTGGCCG TCTATCGCGC GGCACGTGAT
GAGCGCTGCC TGATGGCGCA GGCGCCGACC GGCATCGGCA AGACGGTCGG CACCGTGTTT
CCGCTGCTGA AGGCCTGCGG CGAGGGCGAG CTCGACCACG TGTACTTCCT GACCGCGAAA
ACGCCCGGCC GCGCGCTCGC GCTCGAAGCG GCAACGACGC TCGGCGCCGG CACGCCCGCG
CTGCCGCTGC GCGTGCTGGA ACTCGTCGCG CGCGACAAGG CGTGCGAGCA CCCGGACAGC
GCGTGCCACG GCGAATCGTG TCCGCTGGCG AAAGGTTTCT ACGACCGGCT GCCGGCCGCG
CGCGACGCGG CGATCGAGGC CGGGCTGCTC GACCGCGACA CGGTGCGCGC GGCCGCGCTC
GCGCACGACG TCTGCCCGTA CTACCTGTCG CAAGAGCTCG CGCGCTGGTC CGACATGGTG
ATCGGCGACT ACAACTACTA CTACGACGGC AGCGCGATGC TGCACACGCT CGCGCAGCAG
AACCAGTGGC GTGTCGGCGT GCTGGTCGAC GAAGCGCACA ACCTGCTCGA TCGCGCGCGC
AAGATGTACA GCGCGTCGCT CGATCCGTTC GCATTCGCGG CGGCCCGCGA GGCCGCGCCC
GCTGGGCTGC GCAAGGCCTT CGACCGGCTC GCCCGCGCGT GGGGCACGGT CAGTCGTGCG
CAGGCCGAGC GCTATGCCGC GTATCCGGAG ATACCGGGCC CGATCGTGTC GGCCGTGCAG
AACCTCGTCG CAGCGATCGG CGAGCACCTG ACCGACGCGC CGCGCGCGAA CGGCGACGCA
CTGCTGCGGT TTCATTTCGA GGCGATCCAG TTCGGCGTGC TTGCGGAAGC ATTCGACAGC
GCGTCGATCT TCGACGCAAC GCTGCACAGC GAACCGATGC CGCGCCAGCC GGCGCTCGAC
GGCGTCGCGT CGGCCGGCCG CCGGCGACGC GTCCAGTCGA CGCTGTGCGT GCGCAACGTG
ATTCCGGCCG GCTTTCTCGC GCCGCGCTAC GAAGCCGCGT GCGCGACCGT GCTGTTCTCG
GGCACGCTGA GCCCGTTTCA CTTCTACCGC GACACGCTCG GGTTGCCGGG CGACACGGGC
TGGCTCGACG TCGACGGGCC GTTCCGCGCC GAGCAATTGA CGGTGCGCGT TGCGAGCCAC
GTGTCGACGC GCTGGCGCGA CCGCGACCGT TCGCTCGAAC CGATCGTCGA CCTGATCGCC
GCGCAATACG CGACGCGGCC CGGCAACTAC CTCGGCTTCC TGAGCAGCTT CGACTACCTG
GGGCGCGTGG TCGCGCTGAT GCAGACTCGG CATCCGGACG TGCCCGTCTG GGCGCAGGCG
CCCGGCATGG CCGAAAGCGA GCGCGACGCG TTTCTTGCAC GCTTCGACGC GGGCGGGCGC
GGTGTCGGCT TCGCGGTGCT GGGCGGGGCG TTTTCGGAGG GCGTGGACCT GGTCGGCGAG
CGGCTGATTG GCGCGTTCAT CGCGACGCTC GGGCTGCCGC AGGTCAACGA CGTCAACGAG
CAGATGCGGC GTGCGATGGA CGCGCGCTTC GGCAACGGCT ACGACTACAT GTACCTGTAT
CCGGGCTTGC AGAAGGTCGT GCAGGCGGCC GGGCGCGTGA TCCGCACCGA GCACGACGAA
GGCGTCGTGC ACCTGATCGA CGACCGTTAC CGGCGGCGCG AAGTGCGCGA TCTGCTGCCG
CGGTGGTGGC GAATCGGGTG A
|
|---|
| Protein sequence | MSYVVAVRAM CEFTARRGDL DLRFTPAPTA LEGIAGHGAV TSNRGARYET EIALTGTWGT
LTVRGRADGY DPVANRLEEI KTYRGSLDAM PANHRALHWA QAKVYAHLLC DARGFQEIDV
ALVYFDIVSE RETVLTQTLG AAELATFFAE QCACFVGWAE RETAHRTARD AALRALAFPH
GQFRSGQREL AVAVYRAARD ERCLMAQAPT GIGKTVGTVF PLLKACGEGE LDHVYFLTAK
TPGRALALEA ATTLGAGTPA LPLRVLELVA RDKACEHPDS ACHGESCPLA KGFYDRLPAA
RDAAIEAGLL DRDTVRAAAL AHDVCPYYLS QELARWSDMV IGDYNYYYDG SAMLHTLAQQ
NQWRVGVLVD EAHNLLDRAR KMYSASLDPF AFAAAREAAP AGLRKAFDRL ARAWGTVSRA
QAERYAAYPE IPGPIVSAVQ NLVAAIGEHL TDAPRANGDA LLRFHFEAIQ FGVLAEAFDS
ASIFDATLHS EPMPRQPALD GVASAGRRRR VQSTLCVRNV IPAGFLAPRY EAACATVLFS
GTLSPFHFYR DTLGLPGDTG WLDVDGPFRA EQLTVRVASH VSTRWRDRDR SLEPIVDLIA
AQYATRPGNY LGFLSSFDYL GRVVALMQTR HPDVPVWAQA PGMAESERDA FLARFDAGGR
GVGFAVLGGA FSEGVDLVGE RLIGAFIATL GLPQVNDVNE QMRRAMDARF GNGYDYMYLY
PGLQKVVQAA GRVIRTEHDE GVVHLIDDRY RRREVRDLLP RWWRIG
|
|---|
| |