Gene Bcep18194_B1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B1593 
Symbol 
ID3753358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp1813216 
End bp1814538 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content71% 
IMG OID637766442 
Producthypothetical protein 
Protein accessionYP_372351 
Protein GI78062443 
COG category[M] Cell wall/membrane/envelope biogenesis
[S] Function unknown 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3455] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03349] type IV / VI secretion system protein, DotU family
[TIGR03350] type VI secretion system OmpA/MotB family protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.442796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.302538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCT CCTCCGATTC GATCTCCCCC GGCACCGGCG GATTCGTGCC GCCGAATCCG 
GGCGGCATGC ATCCGGCCGC GGCGGGCGCG GCCGGCCCGA CCGCGACGCA GCCGCGCCCC
GGGCGCTGGG CCGCGAGCGG AACGAACCCG CTCGTCGCGG CCGCGAATCC GTTGCTCAAC
CTGGTGCCGC AGATCCGCTC GACCGTCCAT CACCCGAATC CGGCGTGGCT GCGCGAGCAT
CTGGTCGTCG AGATCCGGCA GTTCGAGGCC CGTGCGCAGG AAGCCGGCGT GCCGTCGGAA
GCGATCATCG GCGCGCGCTA CTGCCTGTGC ACGGCGCTCG ACGAGGCCGC CGCGTTGACA
CCGTGGGGCG GCAGCGTCTG GTCGTCGCAC AGCCTGCTCG TGTCGTTCCA CAACGAAACG
TGGGGCGGCG AGAAATTCTT CCACCTGCTC GAACGCCTGT CGCAGCAGCC GCGCCAGCAT
CTCGACCTGC TCGAGCTGCT GTATTTCTGT CTCGCGCTCG GCTTCGAGGG CCGCTATCGG
GTGCTCGACA ACGGCCATGC GCAGCTCGAC GCGCTGCGCC ACCAGCTCGC GCTGACGATC
CGCTCGGTGC GCGGCGAATT CGAGCCGGCG CTGTCGCCGC ACTGGCGCGA CGTCGTCACG
CGCGATGTCG CGCGCCGGTT CGTCGTGCCG CTGTGGGTCT GCGTGGCGCT CGCGCTGCTG
ATCGGCTTCG GCGTGTTCGT CGGGCTGCGC ATTGCGCTCG CCGGGCATTC GGATCGGCTG
TTCGCGTCGA TCGACGCGCT GCACGTGCCG AAGCTGCAAC CCGCACAGGC GCCACCGCGC
CCGGCACCGG CGCCGCGCAT CGCGAAGTTC CTGGAACCGG AGATCGCGGC CGGCCTCGTA
TCGGTGCGCG ACGACGCCGA TCGGAGCGTG ATCGTGCTGC GCGGCGACGG GTTGTTCAAG
TCCGGCTCGA CGTCGGTGAT CGACCGCTAC GTGCCGGTGC TCGCGCGGGT GGCCGACGCA
CTGAACAAGG TGCCCGGCAA CGTGCGGGTG ACCGGCTATA CCGACGACAC GCCCGTGCAT
ACGGCGCGCT TCGCGTCGAA CTGGGACCTG TCGCGCGAAC GCGCGGAAGC CGTGCGCGGG
ATGATCGCCG CGCGGCTCGA CCATCCGGAA CGGCTCGCGG CGGAAGGGCG CGGCACGCTC
GACCCGGTCG CACCGAACGA TTCGCCGGCG AACCGCGCGC TGAACCGGCG CGTCGAGATC
ACGCTGCTGC CGGCGCCCGG CAGTGCCGCC GTCGGCGCGA GCGCCACGCA GGGAGCCAAC
TGA
 
Protein sequence
MNSSSDSISP GTGGFVPPNP GGMHPAAAGA AGPTATQPRP GRWAASGTNP LVAAANPLLN 
LVPQIRSTVH HPNPAWLREH LVVEIRQFEA RAQEAGVPSE AIIGARYCLC TALDEAAALT
PWGGSVWSSH SLLVSFHNET WGGEKFFHLL ERLSQQPRQH LDLLELLYFC LALGFEGRYR
VLDNGHAQLD ALRHQLALTI RSVRGEFEPA LSPHWRDVVT RDVARRFVVP LWVCVALALL
IGFGVFVGLR IALAGHSDRL FASIDALHVP KLQPAQAPPR PAPAPRIAKF LEPEIAAGLV
SVRDDADRSV IVLRGDGLFK SGSTSVIDRY VPVLARVADA LNKVPGNVRV TGYTDDTPVH
TARFASNWDL SRERAEAVRG MIAARLDHPE RLAAEGRGTL DPVAPNDSPA NRALNRRVEI
TLLPAPGSAA VGASATQGAN