| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1559 |
|---|
| Symbol | |
|---|
| ID | 3753324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 1762777 |
|---|
| End bp | 1767045 |
|---|
| Gene Length | 4269 bp |
|---|
| Protein Length | 1422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637766408 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_372317 |
|---|
| Protein GI | 78062409 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3831] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00113034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.54885 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGTT TTGAACTGAT CGAAGGCAAT TCCAGCAAGT TCTGGGAAGT GGAGCAGGAC
GGCTCCGGGC TCAATATCCG CTGGGGCCGC ATCGGCACCG CGGGCCAGAG CCAGACGAAG
GCGTTCGCGG ACGACGCGAA GGCGCGCGCC GCGCTCGACA AGCTCGTCAA GGAAAAGACC
GGCAAGGGCT ATGCGGAAGT CGCGGTGGCG GCCGGCACCA GCATCGGCGC GACCGCCGCG
AAGCCGCCGG CCGCCGTGCC GTCGGCCACT TCGACCGCCG TGCCGGAGGG GGCCGCAAAG
GCAGAGGCAG AAACGGCCGC GAGCGCGCAA CCCGCAGCGG CGAATGTCGC GCATGGTGCG
CCGCCCGCGC CTCCGGGCCA GCCGGCCGCG TTGGCGCCGC TTTCGACGGC CGCATCAACC
ACGGCCCCCG CACCCGTGCC GCCCGTCGCC ACCGAAAGTA TCGACGCCCA GTGCGAGCGC
GTCTTCGAAA TCATGCGCGC GCAGATCGCG AACGGCGAGA TGAAGCCTGG CGAGAAACTG
ACGGTCGCTG CGATCAAGCG CCGCTATAAC GTCGGCGACC AGGGCGCCGC GATGGCGTTC
GACCTGCTGA AGTCGCGCCG TCTGCTGTAC GGCTGGGGAA CGTCGGCCGC CGTGCACGAC
CACGCGCAGG CGGCAGCCGT GGCGCTGGGC GAGTCGGTGG CGACCGAGGC CGCCGCACTG
GCGCCCGCCG CACCCGCGGT CGCCGACACG GGCGCACCGC CGTGGCTGGC GCACGGCGAC
CCCGTGCGCC TGTCGCCGCA GATGCAGCGC GAAGCCTATG CGTCGCGCCG CTTTCCCGTC
GAGGTGACGG TGCTCGACGT GCGCGCCGCG TGGCTGAAGA TCGAAGGCAA GGACGGTTAC
TCGATCGACA TCGGCGCGAC CGATGCGGCG CTGCGCCCGG CCGTCCAGCG GATGCTCGAC
CGGCTGGCCG CGCGCACGCC GATTGCCGGT CCGGTGGCGG ATGCGGAAGC CGATGCCGCG
CTGTTCGCGC TGGCGATGAC CGTCGGCGAC TATCACGGCG AAACCACGAT CAGCCGCCCG
GTCGTCGATT ACCTGGTTGC GCAATACGGC TTGACGGGCA CGATCGACGT GCTGCTCGAT
GCGTTGAAAA TCCAGGTGCA TGCCGACTAC GACCGTCAGG CGCAGCGCCG CGTCCACCGC
TTCACGACGA ATGTCGAAGG CCCGGTGCGC GGTAGCTGGC GCGGGCCGAT CGTCGGCAGC
GAGGCGGCGC TGCGCGAGCA TCTCGCCGCC GCGAGCGAGG CGGACTGGCA GGCCTGCGTC
GACAGGAGCG AGGCCGCGTT GCCGATGCTG CACCCGACCC GCCAGCCGAT TCCCGCACTG
TTGTTGCCCG ATGCGCCGCA CGTGTCGAAT GCCCTGGTGC GCCGGCTGGG TGCCGAGCGC
GACGTGCCCG AGACGCTGCA CTGGATGTTG CTGACCGCGA CCGATCCCGA TGCGATCGCG
ATCGCCGCGA AAATCCGGCC GGACAGCTAT GGCCATTCGT TCTGGGGGCT GTCGCGGATG
GTCGCGACTG CGCTGCGCGA GCGCGGCGCG GCGGCGTTCG ACGTGCTCGA ACGCGGCGCC
GCCGACGATG CGGCGGGCGA CGCGCTCGCC GCGATCGGCA CGCCCGACGC GGTGGCGGCA
CTGGCGAAGG TCGCGAGCGG TTCGAAGGGC GCACTCGCGC GCCTGTCGCT GTCGCTCGAT
CGCTGGCCGG TGGCGGGCAT GGTCGCGCTG TCGCGGCTCG TGGCCGCGGG CGGCAAGGAT
GCCGGCCTGC TGACGCCGAG CCTGACACGC CTGCTGCGCG CGCATACGGC GCACGTCGAC
GGGCTGCGGC CGTGGCTCGA CGCACCGGCA CAGGCGGTGA TCGACAAACT GCTCGCGCTG
CTGGCCGGCC CGGCCGACGT CGCATCGACG GACGAATTGC CGGGCGTGCT CGCCGCGCCG
CCGTGGCTTG CCGCGCGGCA GAAGAAGGCC GCTGCACTGA CGCTGGAGCC GCTCGAGCTG
GCGGCGATCG AATGCTGGGA CGAAGCGAAG CGCAACCACG CGAAAACGCC GGACCAGTGG
GAGGCGAAGC GACTTGCCGA GGCGGCGAAG AACACGCTGA CGCTGGCCGC GGGCCTGGGT
TTCGACGCGA GCAAGAAGTA CTACGGGCCG CTCGGCGAGG CTGCGGCAAA GGCGATCCGG
CAAGGCGACG CGCCGGCGTT CGTCACCGCG TGGCGCGCGA TGATCGACGA GCGCAAGCGC
GAGCGGTACT TCTGGTACTC GCTGCGCGCC GAGTACCTGA CGCTGCTGCC GGCCGCGGTG
GCCGTCGACA TCTGGAACGC GATCGCAGGC GACTACAGCA CGGCCGGCGT CAACATGCTG
ATGGCGACTT TCGGCTTGCC CGCGTTGCCC GGCCTCATGG CAACCGTGCG CAGCAAGCCG
ACGGAGAATT TCAGTTACGC GCTGAACTAC GGCGCCATCG AATGCGCGCC GATCGCGGCC
CGCGCGTTCG CGAAGCTGAA GACGTTGCGC GACGACGGCC GTGCGTGGCT GCTGAAGTTT
CCCGAGCATG CGGCCAGCGG CCTGATCGCG CCGTCGCTCG GCAAGCCGGG CGAAGCGCGC
GACTGCGCCG GCACCGCGCT GCGTTTGCTG CAGGCGAACG GCCACGAGGC GCTGCTGATG
GACGTCGCCT CGCGCTATGC CGACGCCGCG GTGCCGCAGG CGGTGCGCGC GGTGCTCGAC
GAGAGCCCGC TCGACCGGTT CCCGACCAAG CGCAGCAAGC TGCCCGAATT CTGGCAGCCG
CGCGGCTGGC GCCGGCCGGT GCTGAAGAAC GGCAAGGCGC TGCCGGACGA TGCGCTCGAC
CCTCTCGGCC AGATGCTGAC GTTCCCGACC AGTGAAGGGA TCTACGGCGG CATCGACATC
GTGAAGGACG CATGCACGGC GGAGTCGCTG GCCGACTTCT CGTGGGATTG CTTCAACGCA
TGGCTCGATG CCGGCGCGCC GGGCAAGGAA GGCTGGGCAC TGAACGCGCT GGGCCTGTTC
GGCAACGACG ACACCGCACG CAAGCTGACG CCGCTGATTC GCACGTGGCC CGGCGAATCG
GCGCACGCAC GCGCGGCGAC CGGCCTCGAC GTGCTGGCCT CGATCGGCAG CGACGTCGCG
CTGATGCTGC TCAACGGCAT CGCGCAGAAG GTCAAGTTCC GTGCGCTGCA GGACCGCGCG
CGCGAGAAGA TCGACGCGAT CGCGGAAGCA CGCGGGCTGT CGTCGGAGGA GCTGGAAGAT
CGTCTCGCGC CGGATCTCGG GCTCGACGCG CAGGGCACGA TGCTGCTCGA CTTCGGTCCG
CGTGCGTTCC GGGTCGGCTT CGACGAGACG CTCAAGCCGT ATGTGCGCGA GACCGGTGCC
GACGGCGTGG CCGGCGCGCG GCTCGCGGAT TTGCCGAAGC CGAAGAAGAC CGACGATGCG
GAGAAGGGCA AGGAAGCGGT CGAGCGCTTC AAGCTGCTGA AGAAGGATGC GCGCACCATC
GCGAGCCAGC AGCTCGCGAG GCTCGAGGTG GCGATGTGCG GCCGCCGCCG CTGGACGCCG
GAGGTGTTTC GCGCGTTTCT CGCCGAGCAT CCGCTGGTGC GTCACCTGGT TCAGCGTCTC
ATCTGGGGCG TGTACGAAGT CGATGACGGC GGCAACTTCG GCGGCACGCT GAAGGCTTGC
TTCCGCGTGG CGGAAGACGG CACCGCGGCC ACGGCCGACG ACGACGCGTT CACGTTGCCG
GAAGGCGCGA CGATCCGCAT CGGCGTGCCG CATGCGCTGG AGATCGCGCC GGCCGACGCC
GCCGCGTTCG GGCAGGTGTT CGCCGACTAC GAGCTGCTGC AGCCGTTCGC CCAGCTCGGG
CGCGACGTGT ACCGGCTGAC CGACGATGAG CGCAACGGGC GGCTGCTCGA ACGCTGGAAG
GGTGTCAAGG TACCGACCGG CCGCGTGCTC GGGCTCGTCA ACAAGGGCTG GCGCCGTGGC
CAGGTGGAGG ATGCCGGCTG CATCTGGTAT TTCACGAAGC CGCTCGGCGC GGGCAAGGTG
ATCGAACTGT CGCTCGATCC GGGGATCATC GTCGGGGCGG TCGACATGTA TCCGGATCAG
GAGCTCGGTG CGTTGCAGGC CGGCTCGCCG TCGAACTGGG GCAGTATTCG CGAGGCGGAT
TCGCTGTCGA CGCTCGACGA GATCTCGGCG AGCGAGTTGA TCCGCGATCT GGAGGGGATG
CGCGAGTAA
|
|---|
| Protein sequence | MRRFELIEGN SSKFWEVEQD GSGLNIRWGR IGTAGQSQTK AFADDAKARA ALDKLVKEKT
GKGYAEVAVA AGTSIGATAA KPPAAVPSAT STAVPEGAAK AEAETAASAQ PAAANVAHGA
PPAPPGQPAA LAPLSTAAST TAPAPVPPVA TESIDAQCER VFEIMRAQIA NGEMKPGEKL
TVAAIKRRYN VGDQGAAMAF DLLKSRRLLY GWGTSAAVHD HAQAAAVALG ESVATEAAAL
APAAPAVADT GAPPWLAHGD PVRLSPQMQR EAYASRRFPV EVTVLDVRAA WLKIEGKDGY
SIDIGATDAA LRPAVQRMLD RLAARTPIAG PVADAEADAA LFALAMTVGD YHGETTISRP
VVDYLVAQYG LTGTIDVLLD ALKIQVHADY DRQAQRRVHR FTTNVEGPVR GSWRGPIVGS
EAALREHLAA ASEADWQACV DRSEAALPML HPTRQPIPAL LLPDAPHVSN ALVRRLGAER
DVPETLHWML LTATDPDAIA IAAKIRPDSY GHSFWGLSRM VATALRERGA AAFDVLERGA
ADDAAGDALA AIGTPDAVAA LAKVASGSKG ALARLSLSLD RWPVAGMVAL SRLVAAGGKD
AGLLTPSLTR LLRAHTAHVD GLRPWLDAPA QAVIDKLLAL LAGPADVAST DELPGVLAAP
PWLAARQKKA AALTLEPLEL AAIECWDEAK RNHAKTPDQW EAKRLAEAAK NTLTLAAGLG
FDASKKYYGP LGEAAAKAIR QGDAPAFVTA WRAMIDERKR ERYFWYSLRA EYLTLLPAAV
AVDIWNAIAG DYSTAGVNML MATFGLPALP GLMATVRSKP TENFSYALNY GAIECAPIAA
RAFAKLKTLR DDGRAWLLKF PEHAASGLIA PSLGKPGEAR DCAGTALRLL QANGHEALLM
DVASRYADAA VPQAVRAVLD ESPLDRFPTK RSKLPEFWQP RGWRRPVLKN GKALPDDALD
PLGQMLTFPT SEGIYGGIDI VKDACTAESL ADFSWDCFNA WLDAGAPGKE GWALNALGLF
GNDDTARKLT PLIRTWPGES AHARAATGLD VLASIGSDVA LMLLNGIAQK VKFRALQDRA
REKIDAIAEA RGLSSEELED RLAPDLGLDA QGTMLLDFGP RAFRVGFDET LKPYVRETGA
DGVAGARLAD LPKPKKTDDA EKGKEAVERF KLLKKDARTI ASQQLARLEV AMCGRRRWTP
EVFRAFLAEH PLVRHLVQRL IWGVYEVDDG GNFGGTLKAC FRVAEDGTAA TADDDAFTLP
EGATIRIGVP HALEIAPADA AAFGQVFADY ELLQPFAQLG RDVYRLTDDE RNGRLLERWK
GVKVPTGRVL GLVNKGWRRG QVEDAGCIWY FTKPLGAGKV IELSLDPGII VGAVDMYPDQ
ELGALQAGSP SNWGSIREAD SLSTLDEISA SELIRDLEGM RE
|
|---|
| |