| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1528 |
|---|
| Symbol | |
|---|
| ID | 3753293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 1722524 |
|---|
| End bp | 1723489 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637766377 |
|---|
| Product | ABC transporter, substrate-binding protein, aliphatic sulphonates |
|---|
| Protein accession | YP_372286 |
|---|
| Protein GI | 78062378 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.208633 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGAGCC GAATCGTCAC GGCATTCTTG CTGGCGCTTG CCGCGCAGCC GGGCATTGCC
AAGGACACCG TCACGCTGCG CGTCGGTGAA CAGAATTACT TCAACATCCA GGCGTCGATG
GAGGCGTCCG GCGTGCTGAA GGACCTGCCT TACACGATCG AGTGGAAGCA TTTCCAGGCC
GCTGCGCCCG TTGCCGAGTC GCTGAACGGC AACGCAATCG ACGTCGGCTT TCTCGGCGAT
TCCGCGCTGC TCACGCTGGC CGCGCGCGGC GCGCCGGTGA AGGTGGTTGC CGTGTCGCGG
CAGAGCCTCG ACGGCGTCGC GATTCTCGTG CCGAAGGATT CGCCGGTGCG CACCGTGGCC
GACCTGCAGG GCAAGACCAT CGCCGTATGG CGCGGCGCGT GGAGCCAACA GCTCGTGCTG
CGCGCGCTCG AACATGCGGG CTTGCGCGCG GACTCGGTCA AGTACGCGTA CCTGATGCCG
ATCGATGCGA CCAACGCGTT CGCGAACGGC TCGGTCGACG CGGTGTCGCT GTGGGAGCCG
TTCGTCAGCA CGCTCGCGTT GCGGCAGGGT GCGCGGCCCG TGACGACCGC GCAGGGGCTG
ATGCCGGCGC TGAGCTTCGT TGCCGCGAAC GAGCAGGCCG CCTCCGGCAA GCGCGCCGAG
ATCACCGATT TCCTGCGACG CGTGGTGGCC GCGCGCCAGT GGGTCGACAG CCATCCGCGC
GAGTACGCGG ACCTGTGGGC GAAGCGCGCG AAGCTCGAAC CCGACGTCGC GTATCGCTGG
CTCAACAACG CGAAGCAGCG CGTCGGCCCG GTCGACGAGA CGGCCGCGAA GGATGCGCAG
AACACGGCCG ACTTCCTGCA CAAGGCCGGG GTGATTCCGG CGGCGTACGA CACGTCGAAG
CTGCTCGACC GCTCGTATGC GGGCGCGTTC GCGGCGCCTG CGCAGAAGAC GGCCGCCGCG
CAGTAA
|
|---|
| Protein sequence | MLSRIVTAFL LALAAQPGIA KDTVTLRVGE QNYFNIQASM EASGVLKDLP YTIEWKHFQA
AAPVAESLNG NAIDVGFLGD SALLTLAARG APVKVVAVSR QSLDGVAILV PKDSPVRTVA
DLQGKTIAVW RGAWSQQLVL RALEHAGLRA DSVKYAYLMP IDATNAFANG SVDAVSLWEP
FVSTLALRQG ARPVTTAQGL MPALSFVAAN EQAASGKRAE ITDFLRRVVA ARQWVDSHPR
EYADLWAKRA KLEPDVAYRW LNNAKQRVGP VDETAAKDAQ NTADFLHKAG VIPAAYDTSK
LLDRSYAGAF AAPAQKTAAA Q
|
|---|
| |