| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1361 |
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| Symbol | |
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| ID | 3753126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | + |
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| Start bp | 1550191 |
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| End bp | 1551987 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637766210 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_372119 |
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| Protein GI | 78062211 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0181036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGC TCGGGCTCAC GTCGAAACTG TCGGTGCTGT TCGCCTGCAT CGGCGTGATC
GCGTCCGGCG CGACCGGCTA TTACACGTAT CGCGCGAACC GCGCGATGCT CGTGCAGGAA
GCGCAGCACA GCCTGCTGAT GTCGACGCAA CTGCTGGGGC AGCGCTTCAC CACGGCGCTG
TCCGACGTCG CGGACGATGC GCTCGTGCTC GCGCAGTTGC CGTCGTGTGC GCCGGTCTCG
GGCGGCGACA ACCGCGATGG CGCGCCACGC GCGCGGCTCG AGCAGGTGTT CTTCAGCTTC
ATGAGAAATC ACCCGGAGTA CCTGCAGATC CGGTTGATTG CGAGCGGGGA TTTCGGGCTC
GAACGCATCC GCGTCGATCG CGACGCACAC GGCATCGTCG TATTGCCGGA CAGTGCGTTC
CAGGAGAAAG GACAGTTTTC CTATGTATTC GATACGCTCG CGACGGCGCC CGGTCATATC
TACCTGTCGC CGATCGTGAT CAACCACGAG ACGGGGTCGC ACGCGGCCGA AGGGCTGCCG
ATCCTGCGCG TGGGCACGCC GGTCGTCGAC ACGTCGGGCC GGACGGTTGG CGCACTCGTC
GTCGATGTCG AGCTGTCGCG CGTGTTCGAG CGGCTCGAAC GCGATTTGCC GGAAGACTAT
GCGGTGTATC TCGCGAACGA ATGGGGCGAT TTCCTCGTGC ACCCCGATCC GTCGCAGACG
TTCGGCTTCG ATCGCGGCCG GCGCGTGCTG ATGCAGGATC GTTTCGCCGC CACACGCGCG
CTGTTCGACA GCGCGCGCGC AAACGTTACC CTCAATGGCC TGACCGATCC CGCTGCAGCA
TCGGGGCAGA TGTTCGCGTT CGCGCGCACG CCGTTCGGGC ATGACGAGGG CAACCGCTTC
GTCGTGCTCG GGATGGGGCG CCCGCTGGCG GATGTGCTGG CGCCGGCCGG CATGCTCGGC
GAACGGATCG TCCGGATGGT GCTCGTGTCG AGCTTGATGG CGGTGATCCT CGCGATCCTG
TTCGCGCGCG CGATCACGCG GCCGCTGCAG ACGCTCGCAC GCGCCGCGAC GCACGTGTTC
GACGATCCGG TCGCCGAGCA GTTGCCGGTC GGGCGTGCCG ACGAGATCGG CGTGCTCGCG
CGCTGTTTCG ACAGCATGCG TGTCGAGATC CGCACGCAGG TCGCGATGCT GCGTGCGAAG
CAACTGGAGC TCACGCACCT CGCCGGCCAC GATGCGCTGA CCGAGCTGCC GAACCGCCTG
CTGTTCATGG AGCATCTCGA TACCGCGATC CGGCGTGCGG CCGCGATGCA CGAAGGGCTG
GCCGTGATGT TCGTCGATCT CGACCGCTTC AAGCAGATCA ACGACCAGCA CGGGCACTCG
GCCGGCGACC GCACGCTCGT GGCGGTCGCC AAGCGGCTGA GCCTCGTGCT GCGCGGCGGC
GACATGGTCG CGCGGCTCGG CGGCGACGAA TTCATCGTGC TGATTGCGGA CGTGCGCTCA
CCGGCGGTGA TCGGCGACGT CGCGTCGCGC ATCCAGCTCG TGATGGCGGA GGAACTGGAG
TTCGGCGACC GGCGCGTGGC GGTGGGCGCG AGCATCGGCG TCAGCGAGTT TCCGGCTGAC
GGCGCATCGG CCGAGGAATT GCTCGTCAAG GCCGACGCGG CGATGTACGC GGCGAAGGCG
TCCGCCCAGC GCGCGTTCGT GCGCTATCAG GAACTGGTCG GCAACGGGAG TGTTACCGGC
ACCGACAGCG GGACGGACGA AGCGGCCGGC CGTATCGCGT CGGGCGGCAG CCGGTGA
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| Protein sequence | MIRLGLTSKL SVLFACIGVI ASGATGYYTY RANRAMLVQE AQHSLLMSTQ LLGQRFTTAL
SDVADDALVL AQLPSCAPVS GGDNRDGAPR ARLEQVFFSF MRNHPEYLQI RLIASGDFGL
ERIRVDRDAH GIVVLPDSAF QEKGQFSYVF DTLATAPGHI YLSPIVINHE TGSHAAEGLP
ILRVGTPVVD TSGRTVGALV VDVELSRVFE RLERDLPEDY AVYLANEWGD FLVHPDPSQT
FGFDRGRRVL MQDRFAATRA LFDSARANVT LNGLTDPAAA SGQMFAFART PFGHDEGNRF
VVLGMGRPLA DVLAPAGMLG ERIVRMVLVS SLMAVILAIL FARAITRPLQ TLARAATHVF
DDPVAEQLPV GRADEIGVLA RCFDSMRVEI RTQVAMLRAK QLELTHLAGH DALTELPNRL
LFMEHLDTAI RRAAAMHEGL AVMFVDLDRF KQINDQHGHS AGDRTLVAVA KRLSLVLRGG
DMVARLGGDE FIVLIADVRS PAVIGDVASR IQLVMAEELE FGDRRVAVGA SIGVSEFPAD
GASAEELLVK ADAAMYAAKA SAQRAFVRYQ ELVGNGSVTG TDSGTDEAAG RIASGGSR
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