| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1310 |
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| Symbol | |
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| ID | 3753075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | + |
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| Start bp | 1486907 |
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| End bp | 1488793 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637766159 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_372068 |
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| Protein GI | 78062160 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.968355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACCT GTTCCGTTTC GGGCGCCGCG GCGGCGCCTG GCGCCGGCCG TCCGGCACGC
CGCGTCGCGC GTGTGCTGGA CGCGATGCTG CGCGCGATCG AGTATGTGTC CGCGGTGGTG
CTGGCTGTCG ATGTGCTCGT CGTGTTCGTG TCGGTCGTGT GCCGTTATTT CCTGCACGAC
CCGCTCGACT GGACCGAAGA GGTCGCGAGT GCGCTGATGA TCGTGCTGGT GTTTTTCGGC
GCGGCGACGG TGCTCGGGCG CAGCCAGCAC GTCGGCATCG ACCTGTTTCG CGGCTGGTTC
CCCGCGCGCT GGCAGGGCGC GCTCGTGCAG GTCGGCCACT GGATCGTCGC GGCCGTCTCG
CTGAACCTGC TGGTGTCGTC GTGCCAGCTG CTGGCCGATT CGTACGACCA GTTGACGCCG
GGCGGGCTGC CGGGCTGGAT CAACGTGTAC CCGATGATGT TCGGCGCGCT GTTCATGACC
GTGTTCGCGC TTGCGAATGC GCTCGACGCG CCGCGCCGCC GGGTGGCCGG CACGCTCGCG
TGCTGCACGG TATTCGCGGC CGCGCTGTAC GGATGGAATG CACTGGTGCC GGCACACGCG
ATCGCGCCGG GCATGCTGCT GGCCGCCGGT TTCGTCGGCG GGCTCGTGCT GGGCGTGCCG
ATCGGTTTCG TGCTCGCGTT CTCGGCGCTG CTGTATTTCC TGGCCGACCC GACACTGCCG
CTGCTCGTCT ATTCGCAGCA GGTCATGGCC GGTGCCGATC ACTTCGTGCT GCTCGCCGTG
CCGTTCTTCG TGCTGGCCGG GCTGCTGATG GAATCGAACG GCATGTCCGC ACGGCTCGTC
GAACTGCTGC TGCGGATCTT CGGGCGCGTG CGCGGCGGGC TCGGGCTGAT CGTGATTCTC
GCGACGGCCT GCTTTTCCGG CGTGTCGGGC TCCAAGCTCG CCGACATCGC GGCAGTCGGC
GGCGTCGTGA TGCCGGCGGT GCGCCGTGCG CGCCAGGATC CCGACGAAAC GGCGGCACTG
CTCGCGTGCA GCGCGGTGAT GGCCGAGACC ATCCCGCCCT GCGTGAACAT GATCATCATG
GGCTTCGTCG CGAACATCTC GATTGCCGGC CTGTTCGTCG CGGGCATCGT GCCGGCTGCG
GTGCTCGCCG CATCGCTCGC GGTGGTCACG GTGATCACCG GGCGCAGGAT CGACGTCTCG
GCGGTGTTCA CGGAACGCCG CGCGTGGCTG CCGCTCGCGG GCGGCGCGCT GGTCGTGCTG
GTGATGGTCG CGATGATCGG CAAGGGCGTG ACGTCGGGGA TCGCGACGTC GACGGAAGTC
TCCGCGTTCG CGGTGGTCTA TGCGCTCGTG GCGGGCTGGC TCGCGTTTCG CGAACTGACC
TGGCGTACGG TCGGGCGCGT GTTCGTGCGC GCCGCGTCGA TGGCTGGCGG CATCCTGTTC
ATCGTTGCCG CGGCGTCGAG TGTGTCGTTC GCACTGTCGA TCGAGCAAAT TCCGGCGCTG
GTCTCGGGCA CAATGACCGC GTTCGCCCAC CAGTACGGCG CGACGATGTT CCTGCTGCTC
GCGGCGCTCG TCATGGTCGT GTTCGGTGCG GTGCTCGAGG GTGCGCCGGC GCTGATCATC
TTCGGGCCGC TGCTTGCGCC GATCGCGCTG CAGCTGGGCA TCAACCCGCT GCATTTCGGC
ACGGTCGTGG TGGTGGCGAT GGGGCTCGGC CTGTTCGCGC CGCCGGTAGG GCTCGGTCTG
TTCACGACCT GCGCGATCAC GGGCACCGAC GTCCGGCACG TTGCGCGGCC GATGGTGAAA
TATCTGCTGG TGCTGGTCGC CGCCCTCGTG GCGCTGATTC TCGTGCCGGC GTTTTCGTTG
TGGCTGCCGG CCCGTTTCGG CCTGTAG
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| Protein sequence | METCSVSGAA AAPGAGRPAR RVARVLDAML RAIEYVSAVV LAVDVLVVFV SVVCRYFLHD
PLDWTEEVAS ALMIVLVFFG AATVLGRSQH VGIDLFRGWF PARWQGALVQ VGHWIVAAVS
LNLLVSSCQL LADSYDQLTP GGLPGWINVY PMMFGALFMT VFALANALDA PRRRVAGTLA
CCTVFAAALY GWNALVPAHA IAPGMLLAAG FVGGLVLGVP IGFVLAFSAL LYFLADPTLP
LLVYSQQVMA GADHFVLLAV PFFVLAGLLM ESNGMSARLV ELLLRIFGRV RGGLGLIVIL
ATACFSGVSG SKLADIAAVG GVVMPAVRRA RQDPDETAAL LACSAVMAET IPPCVNMIIM
GFVANISIAG LFVAGIVPAA VLAASLAVVT VITGRRIDVS AVFTERRAWL PLAGGALVVL
VMVAMIGKGV TSGIATSTEV SAFAVVYALV AGWLAFRELT WRTVGRVFVR AASMAGGILF
IVAAASSVSF ALSIEQIPAL VSGTMTAFAH QYGATMFLLL AALVMVVFGA VLEGAPALII
FGPLLAPIAL QLGINPLHFG TVVVVAMGLG LFAPPVGLGL FTTCAITGTD VRHVARPMVK
YLLVLVAALV ALILVPAFSL WLPARFGL
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