Gene Bcep18194_B1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B1297 
Symbol 
ID3753062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp1472213 
End bp1473532 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content68% 
IMG OID637766146 
Productmajor facilitator transporter 
Protein accessionYP_372055 
Protein GI78062147 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0389845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGT CCGCCCTTTC GTTCGCCGGC ACGCCGGTCG ATGCACGCGC CGCCGCGAAG 
AAACGCCGGC TGATCGCGGC CGCCGCCGTC GGCAACGCGC TCGAGTTCTA CGACTTCACG
GTCTACAGCT TCTTCGCCGT CCTGATCGGC AAGCTGTTCT TTCCCGTGCA TTCTCCGTTC
GGGCAATTGA TGCTCGCGGT TGCGAGCTTC GGCGTCGGCT TCGTCACGCG TCCGCTCGGC
GGGCTCGTGA TCGGCATGTA TGCCGACCGC GCCGGCCGCA AGAAGGCGAT GATCCTCACG
CTGTTGCTGA TGGCGCTCGG CACCGCGATG ATCGCGGTCG CGCCGACCTT CGCGCAGATC
GGCCTCGCCG CACCGCTGCT GCTCGTGCTC GCGCGCTTGC TGCAGGGGTT CGCGTCGGGC
GGCGAAGTGG GCGCGTCGAC GACGCTGCTG CTCGAACAGG CGCCGCAGCA TCGCCGCGGC
TTCTACGCTT CGTTCCAGTT CTCGAGCCAG GGCCTCGCCG CGCTCGCCGG TGCGCTGACC
GGCGTCGCGC TGACGTCGAC ACTGAATGCC GCGCAGCTGG AAAGCTGGGG CTGGCGCGTG
CCGTTCATCA TCGGCACGCT GTTCGTGCCG ATCGGCTACT GGCTGCGCCG CACCGTCGAG
GAAGTGCCGG CCGCCGCGCC TGCCGCCGCG CACGACGAGC CGGTCGCATC GCTGCCGCTC
GCCGACGTGC TGCGCCATCA CGGCAAGGCC GTGTTCGCGG GCCTCGGCGT GACGATCGGC
GGCACGTCGA TCCACTACAT CATCGTGTTC TACATGGCGA TCTACGGCGT GCAGGTGCTG
CACCTGCCGA CGTGGCTGTC GATGACGGCC GGCTGCGTCG CCGGTGCGAT CCTGATGCTC
GTGACGCCGA TCGGCGGCCA CCTGTCCGAC GTCTACGGGC GCAACCGGAT CGTCTGGTGG
ACGCGTATCG TGCTGATGGC CTCGATCTAT CCGGCATTCG TCGCGCTGAA CCGCTGGCCG
GGCGCCGCAT CGCTGCTGTC GATCATCGCC GCACTGTCGA TCGTGCATGC GATCAACATC
GGCGCGACGG GTGCGATGCT CGGCGAACTG TTCCCGCGTG CGGTGCGCGC CACCGGCGGC
GCGCTCGTGT ACAGCATCGG CGTCGCGATC TTCGGCGGCT TCGCGCAGTT CTTCGTCACG
TGGCTGATCG CGGCGACCGG CAATCCGAAC GCACCCGCGT GGTACGCGAT CGGCTGTGGC
GCGATGACGC TGCTCGCCGT GCGCTGCATG GATGAAAAGG CCGGGAAGGC ACTCGACTGA
 
Protein sequence
METSALSFAG TPVDARAAAK KRRLIAAAAV GNALEFYDFT VYSFFAVLIG KLFFPVHSPF 
GQLMLAVASF GVGFVTRPLG GLVIGMYADR AGRKKAMILT LLLMALGTAM IAVAPTFAQI
GLAAPLLLVL ARLLQGFASG GEVGASTTLL LEQAPQHRRG FYASFQFSSQ GLAALAGALT
GVALTSTLNA AQLESWGWRV PFIIGTLFVP IGYWLRRTVE EVPAAAPAAA HDEPVASLPL
ADVLRHHGKA VFAGLGVTIG GTSIHYIIVF YMAIYGVQVL HLPTWLSMTA GCVAGAILML
VTPIGGHLSD VYGRNRIVWW TRIVLMASIY PAFVALNRWP GAASLLSIIA ALSIVHAINI
GATGAMLGEL FPRAVRATGG ALVYSIGVAI FGGFAQFFVT WLIAATGNPN APAWYAIGCG
AMTLLAVRCM DEKAGKALD