| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1194 |
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| Symbol | |
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| ID | 3752959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | + |
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| Start bp | 1344565 |
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| End bp | 1347708 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637766043 |
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| Product | hydrophobe/amphiphile efflux pump protein |
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| Protein accession | YP_371952 |
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| Protein GI | 78062044 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000151988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.324447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGT TCTTTATCAG GCGGCCCATC TTTGCGTGGG TGATCGCCAT CGTCATCATG
CTGGCCGGTT ATCTGGCGAT TCGGTCGTTA CCGATCAACC AGTATCCGAA CATCGCGGCG
CCCGCGGTGT CGATCACGGT CAGCTACCCG GGCGCGTCCG CGCAGACGGT TCAGGACACG
GTCGTCCAGC CGATCGAGCA GCAGCTCAAC GGTCTCGACG GCCTGCGTTA CATGTCGTCG
GAAAGTAACG CCGACGGCAG CATGACGATC GTCGCGACGT TCGACCAGGG CACCAACCCC
GATATCGCGC AGGTCCAGGT GCAGAACAAG CTGTCGCTCG CGACGCCGCT TCTGCCCCAG
GAAGTGCAGC AGCAGGGGAT TCGCGTCGTC AAGTACCAGA TCAACTTCAT GATGGTCGCG
GCGCTCGTTT CCGAAGACGG AAAAATGTCG AGCGGCGACC TCGGCAACTA TCTGGCGTCG
AACCTCCAGG ATCCGATCCT GCGAACGAAA GGGGTGGGCG ACTACCTGCT GATGGGTTCG
CAGTACGGGA TGCGGATCTG GCTCGATCCG GCGAAGCTCG ACAGCTATTC GCTCACGCCG
CTCGATGTCA CGAACGCGAT CCGGTCGCAG AACGTCCAGG TATCGTCGGG CCAGCTTGGC
GGCCTGCCGA CGCGGCGTGG CGTGGAACTG AGCGCGACCG TGATCGGGAA GGTGCGCCTG
CGTACCGCCG ACGAGTTCAA GCAGATCCTG CTCAAGGTGA ATGCCGACGG TTCGCAGGTC
AAGCTCGGCG ACGTCGCGAC CGTGAGCCTC GGGCCGGAGA ACTACTCGAT CTCGAGTATG
TACAACGGCA AGCCGTCGGC CGGTATTGCA CTGCGCCTGG CGACCGGCGC GAACCTGCTC
GAGACGGTGG AATCCGTCAA GAAACTGCTC AAGGAACAGG AACCGCTGTT GCCGCCGGGC
GTGAAGATCG TCGTTCCGTA CGATACGTCG CCGGTCGTTC ATGCGTCGAT CCACGAAGTG
GTCAAGACGC TGATCGAAGG CATCATCCTC GTGTTCCTGG TGATGTACCT GTTCCTGCAG
AACATCCGCG CGACGCTGAT TCCGACGTTG GCGGTGCCGG TCGTGCTGCT GGGTACGTTC
GGCGTGCTCG CCGCGTGCGG CTTCACGATC AACACGCTCA CCATGTTCGG CATGGTGCTG
GCGATCGGCC TGCTGGTCGA CGACGCGATC GTCGTGGTGG AGAACGTCGA GCGCGTGATG
ACCGAGGAAG GGCTGAGCGC GCGGGAAGCG ACCAGCAAGT CGATGGGGCA GATCCAGGGC
GCGCTGGTCG GTATCGCGAT GGTGCTGTCG GCCGTGTTCC TGCCGATGGC GTTCTTCGGC
GGATCGACGG GCGTGATTTA TCGCCAGTTC TCGATCACGA TCGTGTCGGC GATGGCGCTG
TCGGTGCTGG TTGCTCTGGT GTTCACGCCG GCGTTGTGCG CGACGATGCT CAAGCCGGGC
GACGCCGATC ATCACGTGAA GAAGGGCTTC TTTGGGTGGT TCAACCGCAC CTTCGACCGC
GGTACCGACC GTTACGAAGG TGCAGTCGCG GCGATCCTGC GCAAGAAGGG GCGCTACATC
GTCATCTACC TGCTGATCGT GGTCGGCATG GGCTTCCTGT TCACGCGCAT CCCGACGGCC
TTCCTGCCGG ACGAAGACCA GGGGACGCTG TTCGTTCAGC TCCAGATGCC GGGCAATGCA
TCGGCGGAAC GGACCGAAGA TGCGTTGGCG AAGGTGCGTG ACTACCTGTT GAAGGACGAG
GCGGATATCG TCGAATCGGT CTACACGGTG AACGGCTTCA ACTTCGCGGG GCGCGGGCAG
AACTCCGCAC TGGCATTCGT CGGGCTCAAG CCGTGGGCCG CGCGCAAGGG GAGCGACACC
ACTGTGTTCG GCCTTGCACA GCGTGCGGGT GCGGCGTTTT CGAAGATCAA GGACGGCATC
GTGATTCCGA TCGTGCCGCC CGCGATCATG GAAATGGGCA ACTCGCAGGG CTTCGACGTG
TACCTCCAGG ATCGGACCGG TCAAGGCCAC GACGCGCTGA TGGCGGCACG CGACCAGTTC
CTGAAGCTCG CGCATGCCAA CCCGCTGCTG GCCAACGTTC GCCCGAACGG CATGAACGAC
GAGCCGCAGT TCCACATCGA TATCGACGAT GAGAAGGCGC GTGCGCTGCA GGTCAGCATC
GCCGACATCA ACGATACGAT GACCGCTGCC TGGGGTTCCC AGTACGTGAA CGACTTCGTC
GATCGCGGCC GTGTGAAGAA GGTGTACGTC CAGGGCCTGC CGGATGCGCG CGTGGGTCCG
GAGGATCTCT ACAAATGGTA TCTGCGCAAC AGCAACGGCC AGATGGTGCC GTTCTCGGCG
GTGGCGTCGG GGCATTGGGA ATACGGTTCG CCGAAGCTCG AGCGCTACAA CGGCATTCCG
GCCGTCGAAC TGCAGGGCCA GCCGACAGCC GGCCACAGCT CGGGCGAAGC GATGCAGGAG
ATCGAGAAGA TCGCGGCGCA GCTGCCGAAC GGATTCGGGC TGGCGGTCAC GGGGCTGTCC
TATGAGGAAC AGCTGTCGGG CTCGCAGGCG CCGGCGCTCT ATGCACTGTC GATCCTGATC
GTGTTCCTCT GTCTTGCCGC GCTGTACGAG AGCTGGTCGG TGCCGTTCTC GGTGCTGATG
GTCGTGCCGC TCGGCGTGAT CGGCGCGGTG GTCGCCACGC TGGCGCGCGG CCTGACGAAC
GACGTGTTCT TCCAGGTGGG CCTGCTGACG ACGGTCGGCC TGTCCGCGAA GAACGCGATC
CTGATCGTCG AGTTCGCGAA AGAGCTGTAC GAAAAAGAAG GGATGTCGCT GATGCAGGCG
GCCGTTCAGG CGGCACGGCT GCGGCTGCGC CCGATCATCA TGACGTCGAT GGCGTTCGTG
CTCGGCGTGC TGCCGCTCGC GATCTCGAAC GGCGCCGGCT CGGGCAGCCA GCACTCCGTC
GGCACCGGTG TGGTCGGCGG GATGATGACC GCGACGTTTC CTGGCCGTGT TCTACGTGCC
GCTGTTCTAT GTGCTGGTGA CGGGCCTGTT CTCGCGCGGC AAGAAAGGCA AGGCCGACAA
GGCCGACGAC ATCGACAAGG TTGA
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| Protein sequence | MSQFFIRRPI FAWVIAIVIM LAGYLAIRSL PINQYPNIAA PAVSITVSYP GASAQTVQDT
VVQPIEQQLN GLDGLRYMSS ESNADGSMTI VATFDQGTNP DIAQVQVQNK LSLATPLLPQ
EVQQQGIRVV KYQINFMMVA ALVSEDGKMS SGDLGNYLAS NLQDPILRTK GVGDYLLMGS
QYGMRIWLDP AKLDSYSLTP LDVTNAIRSQ NVQVSSGQLG GLPTRRGVEL SATVIGKVRL
RTADEFKQIL LKVNADGSQV KLGDVATVSL GPENYSISSM YNGKPSAGIA LRLATGANLL
ETVESVKKLL KEQEPLLPPG VKIVVPYDTS PVVHASIHEV VKTLIEGIIL VFLVMYLFLQ
NIRATLIPTL AVPVVLLGTF GVLAACGFTI NTLTMFGMVL AIGLLVDDAI VVVENVERVM
TEEGLSAREA TSKSMGQIQG ALVGIAMVLS AVFLPMAFFG GSTGVIYRQF SITIVSAMAL
SVLVALVFTP ALCATMLKPG DADHHVKKGF FGWFNRTFDR GTDRYEGAVA AILRKKGRYI
VIYLLIVVGM GFLFTRIPTA FLPDEDQGTL FVQLQMPGNA SAERTEDALA KVRDYLLKDE
ADIVESVYTV NGFNFAGRGQ NSALAFVGLK PWAARKGSDT TVFGLAQRAG AAFSKIKDGI
VIPIVPPAIM EMGNSQGFDV YLQDRTGQGH DALMAARDQF LKLAHANPLL ANVRPNGMND
EPQFHIDIDD EKARALQVSI ADINDTMTAA WGSQYVNDFV DRGRVKKVYV QGLPDARVGP
EDLYKWYLRN SNGQMVPFSA VASGHWEYGS PKLERYNGIP AVELQGQPTA GHSSGEAMQE
IEKIAAQLPN GFGLAVTGLS YEEQLSGSQA PALYALSILI VFLCLAALYE SWSVPFSVLM
VVPLGVIGAV VATLARGLTN DVFFQVGLLT TVGLSAKNAI LIVEFAKELY EKEGMSLMQA
AVQAARLRLR PIIMTSMAFV LGVLPLAISN GAGSGSQHSV GTGVVGGMMT ATFPGRVLRA
AVLCAGDGPV LARQERQGRQ GRRHRQG
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