| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1193 |
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| Symbol | |
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| ID | 3752958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | + |
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| Start bp | 1343393 |
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| End bp | 1344553 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637766042 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_371951 |
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| Protein GI | 78062043 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000622308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.342064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCGGA TGATCATTCC CAAGAGAACC GCCTTGCTTG CGACGTGTGT CGTAGTCGGG
TCGATGGCTG TCGCCGGATG CCAGAAGAAG GAAGCCGCGG TGGCGGCTGT CCCCGAGGTC
GGCGTGGTCA CGCTGCAGCC GCAGGAGATC ACGCTCAAGT CGTTGTTGCC GGGTCGCGCG
AATTCGTGGC GTGTTGCGGA GGTGCGCCCG CAGGTCAACG GCGTGATCAA GCGCCGGCTC
TTCGTCGAAG GCGACGATGT CAAGCAGGGC CAGCAGCTCT ACCAGATCGA CGATGCGCCG
TACAAGGCCG CGTACGAGAA GGCGCGTGCC GCGCTGGTAT CGGCGCAGCA TCTCGCCGAG
CGCAATGAAA AGCTGCTTGC CGACAACGCG GTGAGCCGTC AGCAGTACGA CGACTCGGTG
TCCTCGTATC GCCAGGCACA GGCCGATCTC GATACCGCGA AGGTCAACCT GGACTACACG
AAGGTCTACG CACCGATCGC CGGGCGCATC GGCCGCTCGC TCGTGACGGA AGGCGCACTG
GTCACGAACG GCCAGTCCCA GTCGATGGCG GTCATCACGC AGCTCGATCC CATTTATGTC
GACGTGACGC AGTCGTCGTC CGACATGCTG CGCCTGCGCA AGGAACTCGC CGACGGTCAG
TTGCAGACCG CTAGCGCGGG CGCGGCCAGC GTCGGGTTGT TGCTCGAGGA CGGCACGTCG
TATGCGCACG GCGGCACGCT GAAATTCTCC GAAGTCAGTG TCGACGAAGG CACGGGCTCG
GTGACGTTGC GTGCCCAGTT CCCGAACCCG GATCACCAGA TCCTGCCGGG CATGTTCGTG
CGCACGAAGC TCGACGAGGG CGTCAAGCGG GACGCGATCC TGGTGCCGCA GCAGGGCATT
ACGCGCGATA CGACGGGCAC GCCGGTGGCC TGGGTCGTCG ATGCCGACGG CAAGGTGCAA
CTGAAGCAGC TCGCGGTGGA CCGGACGGTC GGCAATACCT GGCTCGTCCG CTCGGGGCTG
AATGTGGGCG AGCGCGTGGT GACCGAAGGC GTGCAGAAAC TGCAGGTCGG CATGAAGGTC
GTTGCGGTGC CCGCGACGAA CGTCCATGTC GACCTGGGTG ACGCGCGCAT TGCCGCGCCG
TCTACGGCAA ACGGCAGCTA G
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| Protein sequence | MYRMIIPKRT ALLATCVVVG SMAVAGCQKK EAAVAAVPEV GVVTLQPQEI TLKSLLPGRA
NSWRVAEVRP QVNGVIKRRL FVEGDDVKQG QQLYQIDDAP YKAAYEKARA ALVSAQHLAE
RNEKLLADNA VSRQQYDDSV SSYRQAQADL DTAKVNLDYT KVYAPIAGRI GRSLVTEGAL
VTNGQSQSMA VITQLDPIYV DVTQSSSDML RLRKELADGQ LQTASAGAAS VGLLLEDGTS
YAHGGTLKFS EVSVDEGTGS VTLRAQFPNP DHQILPGMFV RTKLDEGVKR DAILVPQQGI
TRDTTGTPVA WVVDADGKVQ LKQLAVDRTV GNTWLVRSGL NVGERVVTEG VQKLQVGMKV
VAVPATNVHV DLGDARIAAP STANGS
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