Gene Bcep18194_B1076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B1076 
Symbol 
ID3752841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp1217397 
End bp1217945 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content67% 
IMG OID637765925 
Productsigma-24 (FecI-like) 
Protein accessionYP_371834 
Protein GI78061926 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.525306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.461788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA GCAACCGCTC CGGGCTCCGG AATCTGCTGG CGACGCGCTA TGCGTACCTC 
GTCAGGCGCC TCGAGCGCGT GACCGGGTCG AAGGACGGCG CCGCCGACGC GCTGCACGAA
ACCTGGCTGC GTCTCGAGAA CGCGAACGTC TCCACGCAGG TGACGAACGC GGACGCCTAT
ATACTCGGGA TGGCGAACAA TGTCGCGATC GACCAGCATC GCCGCGAACG CCGGCATCTG
CACGACGACG ATGTCGAGAC GCTGCTCGAG ATGCCCGACG AACTGGCCGA TCCCGAGCGC
ATCGTCGCGG CGCGCCGCAA GGTCGAGACA TTGAAGGACG TGCTGCGCGG CCTGCCGCCG
CGGCGCCGCG CGATCCTGCT GGCCGCCCGC GTGGACGGCC TGCTGAACCG CGAGATCGCC
GAGCATTTCG GCATTTCGCT GCGGCTCGTG GAAAGCGAGC TGAGTGCGGC AATGAAGTAC
TGCCTGCAGC GCATGCAGGA AGACGGCGAT CCGTACACGG GCACGCGAGG CGGCCCGCGT
AAATTTTGA
 
Protein sequence
MSDSNRSGLR NLLATRYAYL VRRLERVTGS KDGAADALHE TWLRLENANV STQVTNADAY 
ILGMANNVAI DQHRRERRHL HDDDVETLLE MPDELADPER IVAARRKVET LKDVLRGLPP
RRRAILLAAR VDGLLNREIA EHFGISLRLV ESELSAAMKY CLQRMQEDGD PYTGTRGGPR
KF