| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1004 |
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| Symbol | |
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| ID | 3752769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | + |
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| Start bp | 1126236 |
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| End bp | 1127480 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637765853 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_371762 |
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| Protein GI | 78061854 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCCT TATCCCTACG CAGGACGTCG CCTTTGGGTG CGGCCTGTGC ACTGCTGCTG
GCGTTGTCGG GCTGTCACGA CGGCAAAGGC GCATCGTCGG CCCAATCCCT TCCCGAAGTC
GGCGTTGCCA CCATCGCGCC GCGCACGATC CGCCTCGCGG ACGAATTCAA CGGACGCGTC
GAAGCGGTCG ATGCGGTCGA ACTGCGGCCG CGCGTGAGCG GCTATCTGCA GCGTGTCGCC
TACAAGGAAG GCGACCTGGT CGCGCAGGGC GCGCTGCTGT TCGAGATCGA CCCGCGCCCG
TACCGGATCG CGCTCGATCG CGCGAACGCG CAGCTGCAGC GGGCCCGCGC GGCCGCGAGC
CTCGCGAACG TGCAGCTCAA GCGCGTGCAG ACGCTGATCG ATGCGCATGC GACGTCGCAG
GAAGAACTCG ACAACGCGCG CGCCACGGCC GAGCAAGCGC GTGCGGACCT GCAGGCGGCC
GATGCGGCCG TCGCCGATGC GAAGCTCAAT CTCGGTTTCA CCGAAGTGCG CGCGCCGATC
GCGGGCCGCG TCGGCCGTGC GGTCGCCACC GTCGGCAACC TGGCGCGCGC GGACGACACG
CTGCTGACGA CCGTCGTGTC GCAGAACCCC GTCTACGTGT ATTTCGACTG CGACGAACAG
AGCTACCTGC GCTACAACGC ACGGCGTGCC GATCCCAAGC ATCGCGCGAT CGGTGCCGAT
CCGGTGCGCG TGGGCCTCGC GAACGAGACG GGCTTCCCGC ATGCGGGCAC CGTCGACTTC
CTCGACAACC GGCTCGACCC GCAAACGGGC ACGATCCGCG CGCGCGTGCG GCTGCCGAAT
GCGGACCATA CGTTTACGCC GGGCCTGTAT GCGCGCGTGC AGCTCGTCAG CGGCCGCGAC
CAGGATGCTT TGCTCGTCGA CGACAAGGCC GTGCTCACCG ACCAGGACCG CAAGTACGTC
TATGTGATCG GACCCGGCGA CAAGGCGCTG CGTCGTGACG TAACGATCGG TCGCGGGCTG
GATGGCGAGC GGATCATCGA GAAGGGGATT CAGGCGGGCG ACCGCGTGGT CGTCGACGGT
CTGCAGCGGA TCTACTATCC GGGCGCGCAG GTGAAGCCGA AGGCGCTGCC CGCGCGCGCC
GATGCCGGTG GTGCCGGCAA TGGCGCAGGC AACGGCACGG GTAACGGCCC GGGTAACGGC
ACGCAGGCCG TCGCCGATGC CGGCGCGCCG CCGGCTGCGC AGTAA
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| Protein sequence | MLSLSLRRTS PLGAACALLL ALSGCHDGKG ASSAQSLPEV GVATIAPRTI RLADEFNGRV
EAVDAVELRP RVSGYLQRVA YKEGDLVAQG ALLFEIDPRP YRIALDRANA QLQRARAAAS
LANVQLKRVQ TLIDAHATSQ EELDNARATA EQARADLQAA DAAVADAKLN LGFTEVRAPI
AGRVGRAVAT VGNLARADDT LLTTVVSQNP VYVYFDCDEQ SYLRYNARRA DPKHRAIGAD
PVRVGLANET GFPHAGTVDF LDNRLDPQTG TIRARVRLPN ADHTFTPGLY ARVQLVSGRD
QDALLVDDKA VLTDQDRKYV YVIGPGDKAL RRDVTIGRGL DGERIIEKGI QAGDRVVVDG
LQRIYYPGAQ VKPKALPARA DAGGAGNGAG NGTGNGPGNG TQAVADAGAP PAAQ
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