| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0935 |
|---|
| Symbol | |
|---|
| ID | 3752700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 1048116 |
|---|
| End bp | 1049618 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637765784 |
|---|
| Product | amino acid transporter |
|---|
| Protein accession | YP_371693 |
|---|
| Protein GI | 78061785 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.801985 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGGAT GGTCTGGAGT TACCGGCGCA GCGGGCGATA CGCCCGGCGG CACGCCGGCT
GAAGCGGGCG GCGGCACGGC GCTGAAGGCG GGTGCGGTCG GTTTTCCGAC CGCGCTGGCG
AGCGCCGTCG GCCTCATCAT GGCAAGCCCG GTGATTCTCA CCGCGACGTC GGGCTTCGGA
ATGGGCGGCT GGGCGTTCGC GGTCGCGATG ATCATCGCGT TCGTGATGAT GCAGGCGCAG
GCGACGACCT TCTCCGAAGC CGCCGCGATG CTGCCCACGG CCGGCTCGGT TTACGATTAC
CTGTCGTGCG GGCTCGGCCG CTTCTGGGCG ATCACCGGCA CGATCTCCGC GTATTTCCTC
GTGCACGTGT TCGCCGGCAC GGCGGAGACG ATCCTGAGCG GCATCATGGC GCTCGTCAAC
TTCGAATCGC TGAATGCCGC GTTCGAGAAG CACAACAGCT CGTGGCTCGT CGGTGTCGGC
CTCGTCGTCA CGTTCGCGAT CACCAACATC ATCGGCATCA AGGTGTTCAG CAAGCTCGAG
ATCGTGCTGA CGGCCGGCAT GTGGCTGTCG CTGATGATCT TCGGGATTCT CGGGCTCGCG
GCCGCGCCGG CCGTGCACCT CGACGGCTGG TTTGGCGGCT CGGAAGTCGG CACGTCGATT
CCGGCCGTGC TGTCGCTGGT CGGGATGGCG ATGTTCATGT TCGTCGGCTG CGAGTTCGTC
ACGCCGCTCG CGCCGGAAAT GAAGTCGCCG GGCAAGACGA TCCCGCGCGC GATGGCGCTG
GGCCTCGTCG GCGTCGCGAT CTGCATGTTC CTGTACGGCG CGGCGATCCG CCGCCAGGTC
GCGAACGTGC CGGTGAGCCC CGACGGCCTC ACGCACCTGC TCGACACACC GGGCGCGATT
CCCGCGTTCG CGCTGCAGGT GCTCGGGCCC TTCGGCCGCA TCTGGTTCGG CATCGCGTTC
CTGTGCGCGG GCGCCGCGAC GATCAACACG CTGATGGCCG GGCTGCCGCG CATCCTGTAC
GGGATGGCGA TCGACGGGGC GCTGCCGCGC TGCTTCGCGT ACCTGCATCC GCGCTTCAAG
ACGCCGGTGG TCGGCATCGT TGCCGCGGCG ATCGTGCCGA TCTTCCACGC GTGGCTGATC
AACGGCAATC TCGACAGCAT CCTGCACCTC GTGCTGGCCG CGACCTGCGC GTGGGGCACC
GCGTACCTGC TCGTCACCGC GTCGGTCGTG ATGCTGCGGA TTCGCCGCCC GGACCTGCCG
CGCCCGTACC GTTCGCCGCT GTTCCCGCTG CCGCAGATCG TGTCGAGCGT CGGCATCGTC
CTGGCGATCT GGTACATCAC GCCGCCAGGC ATGAACGCGC GCGACATCTA CGTGCCGTTC
GGCGCGATGC TCGGGCTTAC CGCGCTGTAC GCACTGTTCT GGACGCTCGT CGTGCAGCGC
CAGCATCCGT TCAAGCCGGT GCCGGTCGAG GAAGTGCTGC GCAACGAGCA CGTCGCATCG
TGA
|
|---|
| Protein sequence | MSGWSGVTGA AGDTPGGTPA EAGGGTALKA GAVGFPTALA SAVGLIMASP VILTATSGFG
MGGWAFAVAM IIAFVMMQAQ ATTFSEAAAM LPTAGSVYDY LSCGLGRFWA ITGTISAYFL
VHVFAGTAET ILSGIMALVN FESLNAAFEK HNSSWLVGVG LVVTFAITNI IGIKVFSKLE
IVLTAGMWLS LMIFGILGLA AAPAVHLDGW FGGSEVGTSI PAVLSLVGMA MFMFVGCEFV
TPLAPEMKSP GKTIPRAMAL GLVGVAICMF LYGAAIRRQV ANVPVSPDGL THLLDTPGAI
PAFALQVLGP FGRIWFGIAF LCAGAATINT LMAGLPRILY GMAIDGALPR CFAYLHPRFK
TPVVGIVAAA IVPIFHAWLI NGNLDSILHL VLAATCAWGT AYLLVTASVV MLRIRRPDLP
RPYRSPLFPL PQIVSSVGIV LAIWYITPPG MNARDIYVPF GAMLGLTALY ALFWTLVVQR
QHPFKPVPVE EVLRNEHVAS
|
|---|
| |